Job Description Q47005 Confidence 99.65% Date Thu Jan 5 12:36:08 GMT 2012 Rank 31 Aligned Residues 200 % Identity 14% Template c3n6uA_ PDB info PDB header:transcription regulator Chain: A: PDB Molecule:lysr type regulator of tsambcd; PDBTitle: effector binding domain of tsar in complex with its inducer p-2 toluenesulfonate Resolution 1.87 Å

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		91	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170
Predicted Secondary structure
Query SS confidence
Query Sequence		G	Q	V	S	I	G	F	A	P	G	T	A	A	S	S	I	T	M	P	L	L	Q	A	V	R	A	E	F	P	E	I	V	I	Y	L	H	E	N	S	G	A	V	L	N	E	K	L	I	N	H	Q	L	D	M	A	V	I	Y	E	H	S	P	V	A	G	V	S	S	Q	A	L	L	K	E	D	L	F	L	V	G
Query Conservation
Alig confidence																.
Template Conservation																.
Template Sequence		G	H	I	T	F	A	A	S	P	A	I	A	L	A	.	A	L	P	L	A	L	A	S	F	A	R	E	F	P	D	V	T	V	N	V	R	D	G	M	Y	P	A	V	S	P	Q	L	R	D	G	T	L	D	F	A	L	T	A	A	H	K	H	D	I	D	T	D	L	E	A	Q	P	L	Y	V	S	D	V	V	I
Template Known Secondary structure															T	.														T	T										T	T	T	T						T	T	S		S								G	G	G	S		T	T
Template Predicted Secondary structure																.
Template SS confidence
		92	.	.	.	.	.	.	.	100	.	.	.	.	.		.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170
		171	.	.	.	.				.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.		.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.
Predicted Secondary structure							.	.	.																																							.
Query SS confidence							.	.	.																																							.
Query Sequence		T	Q	D	C	P	.	.	.	G	Q	S	V	D	V	N	A	I	A	Q	M	N	L	F	L	P	S	D	Y	S	A	I	R	L	R	V	D	E	A	F	S	L	R	R	L	T	A	.	K	V	I	G	E	I	E	S	I	A	T	L	T	A	A	I	A	S	G	M	G	V	A	V	L	P	E	S	A	A	R	S	L
Query Conservation							.	.	.																																							.
Alig confidence							.	.	.																																							.
Template Conservation
Template Sequence		V	G	Q	R	Q	H	P	M	A	N	A	T	R	L	A	E	L	Q	E	C	R	W	A	F	S	S	A	P	R	G	P	G	A	I	I	R	N	A	F	A	R	Y	G	L	P	E	P	K	L	G	L	V	C	E	S	F	L	A	L	P	G	V	V	A	H	S	D	L	L	T	T	M	P	R	T	L	Y	E	R	N
Template Known Secondary structure					T	T		T	T	T	T			S	G	G	G	G	T	T	S								T	T	S	T	T										T	T													T	T	T							T	S	S		B										S	S
Template Predicted Secondary structure
Template SS confidence
		171	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250
		247	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.
Predicted Secondary structure
Query SS confidence
Query Sequence		C	G	A	V	N	G	W	M	S	R	I	T	T	P	S	M	S	L	S	L	S	L	N	L	P	A	R	A	N	L	S	P	Q	A	Q	A	V	K	E	L	L	M	S	V	I
Query Conservation
Alig confidence
Template Conservation
Template Sequence		A	F	K	D	Q	L	C	S	I	P	L	Q	D	A	L	P	N	P	T	I	Y	V	L	R	R	H	D	L	P	V	T	P	A	A	A	G	L	I	R	W	I	Q	H	H	A
Template Known Secondary structure		T	T	G	G	G								S													T	T	S																	T
Template Predicted Secondary structure
Template SS confidence
		251	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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