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Job DescriptionQ47005
Confidence99.61%DateThu Jan 5 12:36:08 GMT 2012
Rank34Aligned Residues198
% Identity11%Templatec3hhfB_
PDB info PDB header:transcription regulatorChain: B: PDB Molecule:transcriptional regulator, lysr family; PDBTitle: structure of crga regulatory domain, a lysr-type transcriptional2 regulator from neisseria meningitidis.
Resolution2.30 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   8990.........100.........110.........120.........130.........140.........150.........160........
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Query Sequence  LSGQVSIGFAPGTAASSITMPLLQAVRAEFPEIVIYLHENSGAVLNEKLINHQLDMAVIYEHSPVAGVSSQALLKEDLFL
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Template Sequence  PQGVLSVDSAXPXVLH. LLAPLAAKFNERYPHIRLSLVSSEGYINLIERKVDIALRAG. . . . . DDSGLRARHLFDSRFRV
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   91........100...... ...110.........120.........130.........140....... ..150.........160....
 
   169170..... ....180.........190.........200.........210.........220.........230.........240.....
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Query Sequence  VGTQDCP. . . GQSVDVNAIAQMNLFLPSDYSAIRLRVDEAFSLRRLTAKVIGEIESIATLTAAIASGMGVAVLPESAARS
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Template Sequence  IASPEYLAKHGTPQSTEELAGHQCLGFTEPGSLNTWAVLDAQGNPYKISPHFTASSGEILRSLCLSGCGIVCLSDFLVDN
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SSGGGGGGS
B
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   167..170.........180.........190.........200.........210.........220.........230.........240......
 
   246...250..... ....260.........270.........280.........290..
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Query Sequence  LCGAVNGWMS. RITTPSMSLSLSLNLPARANLSPQAQAVKELLMSVIS
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Template Sequence  DIAEGKLIPLLAEQTSDKTHPFNAVYYSDKAVNLRLRVFLDFLVEELG
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GGGGG

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   247..250.........260.........270.........280.........290....
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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