Job Description Q47005 Confidence 73.23% Date Thu Jan 5 12:36:08 GMT 2012 Rank 255 Aligned Residues 206 % Identity 9% Template c3fj7A_ PDB info PDB header:protein binding Chain: A: PDB Molecule:major antigenic peptide peb3; PDBTitle: crystal structure of l-phospholactate bound peb3 Resolution 1.70 Å

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		95	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.											.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.
Predicted Secondary structure																																																								.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																								.	.	.	.	.	.	.	.	.	.
Query Sequence		I	G	F	A	P	G	T	A	A	S	S	I	T	M	P	L	L	Q	A	V	R	A	E	F	P	E	I	V	I	Y	L	H	E	N	S	G	A	V	L	N	E	K	L	I	N	H	Q	L	D	M	A	V	I	Y	.	.	.	.	.	.	.	.	.	.	E	H	S	P	V	A	G	V	S	S	Q	A	L	L	K	E
Query Conservation																																																								.	.	.	.	.	.	.	.	.	.
Alig confidence																									.																															.	.	.	.	.	.	.	.	.	.
Template Conservation																									.
Template Sequence		V	N	L	Y	G	P	G	G	P	H	T	A	L	K	D	I	A	N	K	Y	S	E	K	.	T	G	V	K	V	N	V	N	F	G	P	Q	A	T	W	F	E	K	A	K	K	D	A	D	I	L	F	G	A	S	D	Q	S	A	L	A	I	A	S	D	F	G	K	D	F	N	V	S	K	I	K	P	L	Y	F	R
Template Known Secondary structure								T	T	T															.										S		G	G	G	T									S					S	S										T	T	G	G	G	S		G	G	G
Template Predicted Secondary structure																									.
Template SS confidence
		22	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.		.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100
		165	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.								.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.							.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.
Predicted Secondary structure																													.	.	.	.	.	.	.																							.	.	.	.	.	.
Query SS confidence																													.	.	.	.	.	.	.																							.	.	.	.	.	.
Query Sequence		D	L	F	L	V	G	T	Q	D	C	P	G	Q	S	V	D	V	N	A	I	A	Q	M	N	L	F	L	.	.	.	.	.	.	.	P	S	D	Y	S	A	I	R	L	R	V	D	E	A	F	S	L	R	R	L	T	A	.	.	.	.	.	.	K	V	I	G	E	I	E	S	I	A	T	L	T	A	A	I	A	S
Query Conservation																													.	.	.	.	.	.	.																							.	.	.	.	.	.
Alig confidence																													.	.	.	.	.	.	.																							.	.	.	.	.	.
Template Conservation
Template Sequence		E	A	I	I	L	T	Q	K	G	N	P	L	K	I	K	G	L	K	D	L	A	N	K	K	V	R	I	V	V	P	E	G	A	G	K	S	N	T	S	G	T	G	V	W	E	D	M	I	G	R	T	Q	D	I	K	T	I	Q	N	F	R	N	N	I	V	A	F	V	P	N	S	G	S	A	R	K	L	F	A	Q
Template Known Secondary structure								S	T	T		T	T				S							S										T	T	S	S			T	T	T	T							G	G	G												T						S	S										T
Template Predicted Secondary structure
Template SS confidence
		101	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180
		232	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	M	G	V	A	V	L	P	E	S	A	A	R	S	L	C	G	A	V	N	G	W	M	S	R	I	T	T	P	S	M	S	L	S	L	S	L	N	L	P	A	R	A	N	L	S	P	Q	A	Q	A	V	K	E	L	L	M	S	V	I	S	S	P	V	M	E	K	R	Q	W	Q	L
Query Conservation
Alig confidence																																								.	.
Template Conservation																																								.	.
Template Sequence		D	Q	A	D	A	W	I	T	W	I	D	W	S	K	S	N	P	D	I	G	T	A	V	A	I	E	K	D	L	V	V	Y	R	T	F	N	V	I	.	.	A	K	E	G	A	S	K	E	T	Q	D	F	I	A	Y	L	S	S	K	E	A	K	E	I	F	K	K	Y	G	W	R	E
Template Known Secondary structure		T			S													T	T	S								T	T	T										.	.			T	T												T	T	S										T	T		B
Template Predicted Secondary structure																																								.	.
Template SS confidence
		181	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.			.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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