Job Description Q47005 Confidence 99.94% Date Thu Jan 5 12:36:08 GMT 2012 Rank 8 Aligned Residues 167 % Identity 14% Template c1b9nA_ PDB info PDB header:transcription Chain: A: PDB Molecule:protein (mode); PDBTitle: regulator from escherichia coli Resolution 2.09 Å

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		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80
Predicted Secondary structure
Query SS confidence
Query Sequence		M	N	F	R	R	L	K	Y	F	V	K	I	V	D	I	G	S	L	T	Q	A	A	E	V	L	H	I	A	Q	P	A	L	S	Q	Q	V	A	T	L	E	G	E	L	N	Q	Q	L	L	I	R	T	K	R	G	V	T	P	T	D	A	G	K	I	L	Y	T	H	A	R	A	I	L	R	Q	C	E	Q	A	Q	L
Query Conservation
Alig confidence																																																				.
Template Conservation																																																				.
Template Sequence		A	D	P	R	R	I	S	L	L	K	H	I	A	L	S	G	S	I	S	Q	G	A	K	D	A	G	I	S	Y	K	S	A	W	D	A	I	N	E	M	N	Q	L	S	E	H	I	L	V	E	R	.	A	T	G	A	V	L	T	R	Y	G	Q	R	L	I	Q	L	Y	D	L	L	A	Q	I	Q	Q	K	A	F	D
Template Known Secondary structure																	S	S									T																		T	S						.
Template Predicted Secondary structure																																																				.
Template SS confidence
		17	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.		.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.
		81	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.				.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.
Predicted Secondary structure																											.	.	.
Query SS confidence																											.	.	.
Query Sequence		A	V	H	N	V	G	Q	A	L	S	G	Q	V	S	I	G	F	A	P	G	T	A	A	S	S	.	.	.	I	T	M	P	L	L	Q	A	V	R	A	E	F	P	E	I	V	I	Y	L	H	E	N	S	G	A	V	L	N	E	K	L	I	N	H	Q	L	D	M	A	V	I	Y	E	H	S	P	V	A	G	V	S
Query Conservation																											.	.	.
Alig confidence																											.	.	.																						.	.	.	.	.	.	.	.	.	.
Template Conservation																																																			.	.	.	.	.	.	.	.	.	.
Template Sequence		V	L	S	D	D	D	A	L	P	L	N	S	L	L	A	A	I	S	R	F	S	L	Q	T	S	A	R	N	Q	W	F	G	T	I	T	A	R	D	H	D	D	V	Q	Q	H	V	D	V	L	.	.	.	.	.	.	.	.	.	.	L	A	D	G	K	T	R	L	K	V	A	I	T	A	Q	S	G	A	R	L	G
Template Known Secondary structure								S	S		T	T										T				T	T	S											S	S	S	S			S						.	.	.	.	.	.	.	.	.	.		T	T	S																T	T
Template Predicted Secondary structure																																																			.	.	.	.	.	.	.	.	.	.
Template SS confidence
		102	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150											.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.
		158	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	Q	A	L	L	K	E	D	L	F	L	V	G	T	Q	D	C	P	G	Q	S
Query Conservation
Alig confidence
Template Conservation
Template Sequence		L	D	E	G	K	E	V	L	I	L	L	K	A	P	W	V	G	I	T	Q	D
Template Known Secondary structure				T	T									G	G	G					S
Template Predicted Secondary structure
Template SS confidence
		172	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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