Job Description P30138 Confidence 97.50% Date Thu Jan 5 11:45:56 GMT 2012
Rank 31 Aligned Residues 72
% Identity 19% Template c3pgjB_
PDB info
PDB header: oxidoreductaseChain: B: PDB Molecule: shikimate dehydrogenase;
PDBTitle: 2.49 angstrom resolution crystal structure of shikimate 5-2 dehydrogenase (aroe) from vibrio cholerae o1 biovar eltor str. n169613 in complex with shikimate
Resolution 2.49 Å
Show / Hide SS confidence
Show / Hide Conservation and Alignment quality
   
26 . . . 30 . . . . . . . . . 40 . . . . . . . . . 50 . . . . . . . . . 60 . . . . . . . . . 70 . . . . . . . . . 80 . . . . . . . . . 90 . . . . . . . . . 100 . . . . .
Predicted Secondary structure  
Query SS confidence  
Query Sequence  
L L D S Q V L I I G L G G L G T P A A L Y L A G A G V G T L V L A D D D D V H L S N L Q R Q I L F T T E D I D R P K S Q V S Q Q R L T Q L N P D I Q L T A L Q Q
Query Conservation  
                                                                                       
Alig confidence  
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Template Conservation  
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Template Sequence  
L K G A T I L L I G A G G A A R G V L K P L L D Q Q P A S I T V T N R T .
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F A K A E Q L A E L V A A Y G .
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Template Known Secondary structure  
T T S T T T S S S . . . . . . . . . . . . . . . . . . . T T S . . . . . . . . . .
Template Predicted Secondary structure  
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Template SS confidence  
   
121 . . . . . . . . 130 . . . . . . . . . 140 . . . . . . . . . 150 . . . . . .
. . . 160 . . . . . . . . . 170 .
 
   
106 . . . 110 . . . . . . . . . 120 . . . . . .
Predicted Secondary structure  
Query SS confidence  
Query Sequence  
R L T G E A L K D A V A R A D V V L D C T
Query Conservation  
                                 
Alig confidence  
Template Conservation  
                           
Template Sequence  
E V K A Q A F E Q L K Q S Y D V I I N S T
Template Known Secondary structure  
G G G S S S
Template Predicted Secondary structure  
Template SS confidence  
   
172 . . . . . . . 180 . . . . . . . . . 190 . .
 
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf ] [Import into BibTeX ]