Return to main results Retrieve Phyre Job Id

Job DescriptionP30138
Confidence97.36%DateThu Jan 5 11:45:56 GMT 2012
Rank40Aligned Residues73
% Identity19%Templatec3o8qB_
PDB info PDB header:oxidoreductaseChain: B: PDB Molecule:shikimate 5-dehydrogenase i alpha; PDBTitle: 1.45 angstrom resolution crystal structure of shikimate 5-2 dehydrogenase (aroe) from vibrio cholerae
Resolution1.45 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   26...30.........40.........50.........60.........70.........80.........90.........100.....
Predicted Secondary structure 





























Query SS confidence 















































































Query Sequence  LLDSQVLIIGLGGLGTPAALYLAGAGVGTLVLADDDDVHLSNLQRQILFTTEDIDRPKSQVSQQRLTQLNPDIQLTALQQ
Query Conservation 
    
 


 




 
   

  


 
 


 
 
   

 

 
    


  
   
   
   

   
     
Alig confidence 



































...................















.........
Template Conservation     
 












  

   
   
 
 


...................  

  

        .........
Template Sequence  LKGATILLIGAGGAARGVLKPLLDQQPASITVTNRT. . . . . . . . . . . . . . . . . . . FAKAEQLAELVAAYGE. . . . . . . . .
Template Known Secondary structure 
TT


STT

SSS...................TGGGS
.........
Template Predicted Secondary structure 












...................



.........
Template SS confidence 















































































   121........130.........140.........150...... ...160.........170..
 
   106...110.........120.......
Predicted Secondary structure 









Query SS confidence 





















Query Sequence  RLTGEALKDAVARADVVLDCTD
Query Conservation                



   
Alig confidence  .




















Template Conservation  .             



  
 
Template Sequence  . VKAQAFEQLKQSYDVIINSTS
Template Known Secondary structure  .GGG

S

S


Template Predicted Secondary structure  .









Template SS confidence 





















   173......180.........190...
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions