Job Description P30138 Confidence 95.47% Date Thu Jan 5 11:45:56 GMT 2012 Rank 288 Aligned Residues 144 % Identity 16% Template c3k5pA_ PDB info PDB header:oxidoreductase Chain: A: PDB Molecule:d-3-phosphoglycerate dehydrogenase; PDBTitle: crystal structure of amino acid-binding act: d-isomer specific 2-2 hydroxyacid dehydrogenase catalytic domain from brucella melitensis Resolution 2.15 Å

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		26	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	L	D	S	Q	V	L	I	I	G	L	G	G	L	G	T	P	A	A	L	Y	L	A	G	A	G	V	G	T	L	V	L	A	D	D	D	D	V	H	L	S	N	L	Q	R	Q	I	L	F	T	T	E	D	I	D	R	P	K	S	Q	V	S	Q	Q	R	L	T	Q	L	N	P	D	I	Q	L	T	A	L	Q	Q
Query Conservation
Alig confidence																													.																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																													.																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		V	R	G	K	T	L	G	I	V	G	Y	G	N	I	G	S	Q	V	G	N	L	A	E	S	L	G	M	.	T	V	R	Y	Y	D	T	S	D	K	L	Q	Y	G	N	V	K	P	A	A	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure		S	T	T									S													T	T		.							T	T					B	T	T	B				S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																													.																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.		.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.
		106	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.																		.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.
Predicted Secondary structure																																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		R	L	T	G	E	A	L	K	D	A	V	A	R	A	D	V	V	L	D	C	T	D	N	M	A	T	R	Q	E	I	N	A	A	C	V	A	L	N	T	P	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	L	I	T	A	S	A	V	G	F	G	G	Q	L	M	V	L	T	P	P	W	E	Q	G
Query Conservation																																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.																		.	.	.	.															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation		.	.	.	.	.																		.	.	.	.
Template Sequence		.	.	.	.	.	S	L	D	E	L	L	K	T	S	D	V	V	S	L	H	V	P	.	.	.	.	S	K	L	I	T	E	A	K	L	R	K	M	K	K	G	A	F	L	I	N	N	A	R	G	S	D	V	D	L	E	A	L	A	K	V	L	Q	E	G	H	L	A	G	A	A	I	D	V	F	P	V	E	P	A
Template Known Secondary structure		.	.	.	.	.	S									S								.	.	.	.				B								S		T	T							S		T	T	S	B											T	T	S										S	S			S
Template Predicted Secondary structure		.	.	.	.	.																		.	.	.	.
Template SS confidence
							197	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.					.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.
						169	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.
Predicted Secondary structure		.	.	.	.
Query SS confidence		.	.	.	.
Query Sequence		.	.	.	.	C	Y	R	C	L	W	P	D	N	Q	E	P	E	R	N	C	R	T	A	G	V	V	G	P	V	V	G	V	M	G	T	L	Q	A	L	E	A	I	K	L	L	S	G
Query Conservation		.	.	.	.
Alig confidence		.	.	.	.
Template Conservation
Template Sequence		S	N	G	E	R	F	S	T	P	L	Q	G	L	E	N	V	I	L	T	P	H	I	G	G	S	T	E	E	A	Q	E	R	I	G	T	E	V	T	R	K	L	V	E	Y	S	D	V
Template Known Secondary structure		S	T	T	S					T	T	T	T		T	T						S		T	T
Template Predicted Secondary structure
Template SS confidence
		273	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions