Job Description P30138 Confidence 95.79% Date Thu Jan 5 11:45:56 GMT 2012
Rank 250 Aligned Residues 96
% Identity 18% Template c2vdcI_
PDB info
PDB header: oxidoreductaseChain: I: PDB Molecule: glutamate synthase [nadph] small chain;
PDBTitle: the 9.5 a resolution structure of glutamate synthase from2 cryo-electron microscopy and its oligomerization behavior3 in solution: functional implications.
Resolution 9.50 Å
Show / Hide SS confidence
Show / Hide Conservation and Alignment quality
   
28 . 30 . . . . . . . . . 40 . . . . . . . . . 50 . . . . . . . . . 60 . . . . . . . . . 70 . . . . . . . . . 80 . . . . . . . . . 90 . . . . . . . . . 100 . . . . . . .
Predicted Secondary structure  
Query SS confidence  
Query Sequence  
D S Q V L I I G L G G L G T P A A L Y L A G A G V G T L V L A D D D D V H L S N L Q R Q I L F T T E D I D R P K S Q V S Q Q R L T Q L N P D I Q L T A L Q Q R L
Query Conservation  
                                                                                         
Alig confidence  
. . . . .
Template Conservation  
        .       . . . .                                                                      
Template Sequence  
G L S V G V I G A G P A G L A A A E E L R A K G Y .
E V H V Y D R Y .
.
.
.
D R M G G L L V Y G I P G F K L E K S V V E R R V K L L A D A G V I Y H P N F E V G
Template Known Secondary structure  
S T . S S . . . . S S S T T S T T T S T T T T B T
Template Predicted Secondary structure  
. . . . .
Template SS confidence  
   
147 . . 150 . . . . . . . . . 160 . . . . . . . . . 170 .
. . . . . . . .
180 . . . . . . . . . 190 . . . . . . . . . 200 . . . . . . . . . 210 . . . . . . . . . 220 .
 
   
108 . 110 . . . . . . . . . 120 . . . . . . . .
Predicted Secondary structure  
Query SS confidence  
Query Sequence  
T G E A L K D A V A R A D V V L D C T D N
Query Conservation  
                               
Alig confidence  
Template Conservation  
                                       
Template Sequence  
R D A S L P E L R R K H V A V L V A T G V
Template Known Secondary structure  
T T B S S S
Template Predicted Secondary structure  
Template SS confidence  
   
222 . . . . . . . 230 . . . . . . . . . 240 . .
 
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf ] [Import into BibTeX ]