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Job DescriptionP30138
Confidence96.11%DateThu Jan 5 11:45:56 GMT 2012
Rank207Aligned Residues102
% Identity20%Templatec2d3tB_
PDB info PDB header:lyase, oxidoreductase/transferaseChain: B: PDB Molecule:fatty oxidation complex alpha subunit; PDBTitle: fatty acid beta-oxidation multienzyme complex from2 pseudomonas fragi, form v
Resolution3.40 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   2930.........40.........50.........60.... .....70.........80.........90.........100....
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Query Sequence  SQVLIIGLGGLGTPAALYLAGAGVGTLVLADDDDVH. . . . LSNLQRQILFTTEDIDRPKSQVSQQRLTQLNPDIQLTALQ
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Template Sequence  KQAAVLGAGIMGGGIAYQSASKGT. PILMKDINEHGIEQGLAEAAKLLV. GRVDKGRMTPAKMAEVLNGIRPT. . . . . . .
Template Known Secondary structure  SS

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   315....320.........330........ .340.........350.........360.. .......370.........380.....
 
   105....110.........120...... ...130.........140.....
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Query Sequence  QRLTGEALKDAVARADVVLDCT. DNMATRQEINAACVALNTP
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Template Sequence  . . . . . . LSYGDFGNVDLVVEAVVENPKVKQAVLAEVENHVRE
Template Known Secondary structure  ......SSGGGGGG
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   386...390.........400.........410.........420.
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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