Job Description P30138 Confidence 95.51% Date Thu Jan 5 11:45:56 GMT 2012 Rank 282 Aligned Residues 119 % Identity 13% Template c1o0sB_ PDB info PDB header:oxidoreductase Chain: B: PDB Molecule:nad-dependent malic enzyme; PDBTitle: crystal structure of ascaris suum malic enzyme complexed with nadh Resolution 2.00 Å

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		4	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.																			.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.											.
Predicted Secondary structure																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																.	.	.	.	.	.	.	.	.	.
Query SS confidence																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																.	.	.	.	.	.	.	.	.	.
Query Sequence		R	D	F	M	R	Y	S	R	Q	I	L	L	D	D	I	A	L	D	G	Q	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	Q	K	L	L	D	S	Q	V	L	I	I	G	L	G	G	L	G	T	P	A	A	L	Y	L	A	G	A	G	V	G	T	.	.	.	.	.	.	.	.	.	.	L
Query Conservation																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																.	.	.	.	.	.	.	.	.	.
Alig confidence														.	.							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																.	.	.	.	.	.	.	.	.	.
Template Conservation														.	.
Template Sequence		R	L	L	D	K	Y	Q	D	K	Y	T	M	.	.	F	N	D	D	I	Q	G	T	A	S	V	I	V	A	G	L	L	T	C	T	R	V	T	K	K	L	V	S	Q	E	K	Y	L	F	F	G	A	G	A	A	S	T	G	I	A	E	M	I	V	H	Q	M	Q	N	E	G	I	S	K	E	E	A	C	N	R	I
Template Known Secondary structure								T	T	T	S	S		.	.																								T			G	G	G									S																T	T	T									T
Template Predicted Secondary structure														.	.
Template SS confidence
		280	.	.	.	.	.	.	.	.	.	290	.			.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.
		56	.	.	.	60	.				.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.			.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120			.	.	.	.	.	.
Predicted Secondary structure								.	.	.																																											.	.																		.	.
Query SS confidence								.	.	.																																											.	.																		.	.
Query Sequence		V	L	A	D	D	D	.	.	.	D	V	H	L	S	N	L	Q	R	Q	I	L	F	T	T	E	D	I	D	R	P	K	S	Q	V	S	Q	Q	R	L	T	Q	L	N	P	D	I	Q	L	T	A	L	.	.	Q	Q	R	L	T	G	E	A	L	K	D	A	V	A	R	A	D	.	.	V	V	L	D	C	T
Query Conservation								.	.	.																																											.	.																		.	.
Alig confidence								.	.	.																							.	.																			.	.																		.	.
Template Conservation																																	.	.
Template Sequence		Y	L	M	D	I	D	G	L	V	T	K	N	R	K	E	M	N	P	R	H	V	Q	F	A	K	D	M	P	E	T	T	.	.	S	I	L	E	V	I	R	A	A	R	P	G	A	L	I	G	A	S	T	V	R	G	A	F	N	E	E	V	I	R	A	M	A	E	I	N	E	R	P	I	I	F	A	L	S
Template Known Secondary structure						T	T				B	S	S		S	S			T	T	T	T	T	T		B	S	S					.	.												S						S	S		T	T		S													S	S
Template Predicted Secondary structure																																	.	.
Template SS confidence
		358	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.			.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions