Job Description P30138 Confidence 94.38% Date Thu Jan 5 11:45:56 GMT 2012 Rank 413 Aligned Residues 119 % Identity 13% Template c1gz3B_ PDB info PDB header:oxidoreductase Chain: B: PDB Molecule:nad-dependent malic enzyme; PDBTitle: molecular mechanism for the regulation of human mitochondrial2 nad(p)+-dependent malic enzyme by atp and fumarate Resolution 2.3 Å

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		6	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.																			.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.											.	.	.	.
Predicted Secondary structure																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																															.	.	.	.	.	.	.	.	.	.
Query SS confidence																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																															.	.	.	.	.	.	.	.	.	.
Query Sequence		F	M	R	Y	S	R	Q	I	L	L	D	D	I	A	L	D	G	Q	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	Q	K	L	L	D	S	Q	V	L	I	I	G	L	G	G	L	G	T	P	A	A	L	Y	L	A	G	A	G	V	G	.	.	.	.	.	.	.	.	.	.	T	L	V	L
Query Conservation																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																															.	.	.	.	.	.	.	.	.	.
Alig confidence												.	.							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																															.	.	.	.	.	.	.	.	.	.
Template Conservation												.	.
Template Sequence		L	R	K	Y	R	E	K	Y	C	T	.	.	F	N	D	D	I	Q	G	T	A	A	V	A	L	A	G	L	L	A	A	Q	K	V	I	S	K	P	I	S	E	H	K	I	L	F	L	G	A	G	E	A	A	L	G	I	A	N	L	I	V	M	S	M	V	E	N	G	L	S	E	Q	E	A	Q	K	K	I	W	M
Template Known Secondary structure						T	T	T	S	S		.	.			T	T	T	T																					T	T	T									S																	T	T									T
Template Predicted Secondary structure												.	.
Template SS confidence
		266	.	.	.	270	.	.	.	.	.			.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.
		58	.	60	.		.	.	.	.	.			.		.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.			.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120			.	.	.	.	.	.
Predicted Secondary structure						.						.	.		.																																					.	.																		.	.
Query SS confidence						.						.	.		.																																					.	.																		.	.
Query Sequence		A	D	D	D	.	D	V	H	L	S	.	.	N	.	L	Q	R	Q	I	L	F	T	T	E	D	I	D	R	P	K	S	Q	V	S	Q	Q	R	L	T	Q	L	N	P	D	I	Q	L	T	A	L	.	.	Q	Q	R	L	T	G	E	A	L	K	D	A	V	A	R	A	D	.	.	V	V	L	D	C	T
Query Conservation						.						.	.		.																																					.	.																		.	.
Alig confidence						.						.	.		.																																					.	.																		.	.
Template Conservation
Template Sequence		F	D	K	Y	G	L	L	V	K	G	R	K	A	K	I	D	S	Y	Q	E	P	F	T	H	S	A	P	E	S	I	P	D	T	F	E	D	A	V	N	I	L	K	P	S	T	I	I	G	V	A	G	A	G	R	L	F	T	P	D	V	I	R	A	M	A	S	I	N	E	R	P	V	I	F	A	L	S
Template Known Secondary structure				T	T				B	T	T		S	S				T	T	T	G	G	G		B				S	S			S	S											S							S	S	S			S													S	S
Template Predicted Secondary structure
Template SS confidence
		344	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions