Job Description P30138 Confidence 96.67% Date Thu Jan 5 11:45:56 GMT 2012 Rank 126 Aligned Residues 153 % Identity 16% Template c1gdhA_ PDB info PDB header:oxidoreductase(choh (d)-nad(p)+ (a)) Chain: A: PDB Molecule:d-glycerate dehydrogenase; PDBTitle: crystal structure of a nad-dependent d-glycerate2 dehydrogenase at 2.4 angstroms resolution Resolution 2.40 Å

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		26	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	L	D	S	Q	V	L	I	I	G	L	G	G	L	G	T	P	A	A	L	Y	L	A	G	A	G	V	G	T	L	V	L	A	D	D	D	D	V	H	L	S	N	L	Q	R	Q	I	L	F	T	T	E	D	I	D	R	P	K	S	Q	V	S	Q	Q	R	L	T	Q	L	N	P	D	I	Q	L	T	A	L	Q	Q
Query Conservation
Alig confidence																													.																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																													.																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		L	D	N	K	T	L	G	I	Y	G	F	G	S	I	G	Q	A	L	A	K	R	A	Q	G	F	D	M	.	D	I	D	Y	F	D	T	H	R	A	S	S	S	D	E	A	S	Y	Q	A	T	F	H	D	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure			T	T									S												T	T	T		.							S	S											T					S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																													.																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		145	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.		.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.
		106	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.		.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.				.	.	.	.	150	.	.															.	.	.	.	.	.	.	160	.	.	.	.	.	.	.
Predicted Secondary structure																								.																			.	.	.								.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																								.																			.	.	.								.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		R	L	T	G	E	A	L	K	D	A	V	A	R	A	D	V	V	L	D	C	T	D	.	N	M	A	T	R	Q	E	I	N	A	A	C	V	A	L	N	T	P	.	.	.	L	I	T	A	S	A	V	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	F	G	G	Q	L	M	V	L	T	P	P	W	E	Q
Query Conservation																								.																			.	.	.								.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.																		.																			.	.	.								.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation		.	.	.	.	.
Template Sequence		.	.	.	.	.	S	L	D	S	L	L	S	V	S	Q	F	F	S	L	N	A	P	S	T	P	E	T	R	Y	F	F	N	K	A	T	I	K	S	L	P	Q	G	A	I	V	V	N	T	A	R	G	D	L	V	D	N	E	L	V	V	A	A	L	E	A	G	R	L	A	Y	A	G	F	D	V	F	A	G	E	P
Template Known Secondary structure		.	.	.	.	.	S									S										T	T	T	T	T		B	S					T	T	S		T	T							S		G	G	G	B												T	S							S			T	T	T	T
Template Predicted Secondary structure		.	.	.	.	.
Template SS confidence
							196	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270
		168	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	C	Y	R	C	L	W	P	D	N	Q	E	P	E	R	N	C	R	T	A	G	V	V	G	P	V	V	G	V	M	G	T	L	Q	A	L	E	A	I	K	L	L	S	G	I	E
Query Conservation
Alig confidence											.
Template Conservation											.
Template Sequence		N	I	N	E	G	Y	Y	D	L	.	P	N	T	F	L	F	P	H	I	G	S	A	A	T	Q	A	R	E	D	M	A	H	Q	A	N	D	L	I	D	A	L	F	G	G	A	D
Template Known Secondary structure		S			T	T	G	G	G		.	T	T					S	S		T	T		S																				T	T	S
Template Predicted Secondary structure											.
Template SS confidence
		271	.	.	.	.	.	.	.	.		280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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