 |
Job Description | P27250 | Confidence | 29.41% | Date | Thu Jan 5 11:43:30 GMT 2012 |
Rank | 257 | Aligned Residues | 112 |
% Identity | 17% | Template | d1inla_ |
SCOP info | S-adenosyl-L-methionine-dependent methyltransferases
| S-adenosyl-L-methionine-dependent methyltransferases
| Spermidine synthase
|
Resolution | 1.50 |
|
 |
  |   |
166 | . | . | . | 170 | . | . | . | . | . | . | . | . | . | 180 | . | . | . | . | . | . | . | . | . | 190 | . | . | . | . | . | . | . | . | . | 200 | . | . | . | . | . | . | . | . | . | 210 | . | . | . | . | |
|
|
|
|
|
|
|
|
|
. | . | . | . | . | 220 | . | . | . | . | . | . | . | . | . | 230 | . | . | . | . | . |
Predicted Secondary structure |   |
|
|
|
|
|  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |
|
|
|
| . | . | . | . | . | . | . | . | . | . |  |  |  |
|
|
|
|
|  |  |  |  |  |  |
|
|
|
|  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
I | T | A | T | S | R | V | G | V | I | G | I | G | G | L | G | H | I | A | I | K | L | L | H | A | M | G | C | E | V | T | A | F | S | S | N | P | A | K | E | Q | E | V | L | A | M | G | A | D | . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
K | V | V | N | S | R | D | P | Q | A | L | K | A | L | A | G | Q | F | D | L | I |
Query Conservation |   |
  |   |   |   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |   |   |   |   |   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |
| . | . | . | . | . | . | . | . | . | . |   |
|
|
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |   |
|
|
|
|
|
|
|
|   |
|   |
|   |   |   |   |   |
|
|   |   |   |   |   |   |   |
|   |   |
|
|
|
|   |   |
|
|
|   |
|
|   |   |   |   |   |   |   |   |   |   |   |
|   |
|
|   |
|   |   |   |
|
|   |   |   |
|   |   |   |   |   |   |
|
|
|
|
Template Sequence |   |
H | P | N | P | K | K | V | L | I | I | G | G | G | D | G | G | T | L | R | E | V | L | K | H | D | S | V | E | K | A | I | L | C | E | V | D | G | L | V | I | E | A | A | R | K | Y | L | K | Q | T | S | C | G | F | D | D | P | R | A | E | I | V | I | A | N | G | A | E | Y | V | R | K | F | K | N | E | F | D | V | I |
Template Known Secondary structure |   |
S | S | S |
|
|  |  |  |  |  |  |
| T | T |
|  |  |  |  |  |  | T | T | S | T | T |
| S |  |  |  |  |  |  | S |
|  |  |  |  |  |  |  |  |  |  |
|  |  |  |  | G | G | G | G |
| T | T |  |  |  |  |  | S |
|  |  |  |  | G | G | G |
| S | S |
|  |  |  |  |
Template Predicted Secondary structure |   |
|
|
|
|
|  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |
|
|  |  |  |  |
|
|
|
|
|
|
|
|
|  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
88 | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . | . | . | . | . | 150 | . | . | . | . | . | . | . | . | . | 160 | . | . | . | . | . | . | . |
  |
  |   |
236 | . | . | |
. | 240 | . | . | . | . | . | . | . | . | . | 250 | . | . | . | . | . | . | . | . | . | 260 | . | . | . | . | . | . | . | . | . | 270 | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
 |  |
| . |
|
|
|  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |
Query SS confidence |   |
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
I | N | T | . |
V | N | V | S | L | D | W | Q | P | Y | F | E | A | L | T | Y | G | G | N | F | H | T | V | G | A | V | L | T | P | L | S | V | P | A | F | T | L | I | A |
Query Conservation |   |
  |   |   | . |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
Alig confidence |   |
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|   |
|   |
|   |
|   |
|
|   |   |   |   |   |   |   |
|   |
|
|
|
|
|
|   |
|   |   |
|   |   |   |   |   |   |   |   |   |   |
|   |   |
Template Sequence |   |
I | I | D | S | L | F | T | E | E | F | Y | Q | A | C | Y | D | A | L | K | E | D | G | V | F | S | A | E | T | E | D | P | F | Y | D | I | G | W | F | K | L | A | Y | R |
Template Known Secondary structure |   |
 |  |  |
|
|
| S |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
| T | T | T | T |  |  |  |  |  |  |  |  |  |
Template Predicted Secondary structure |   |
 |  |
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
168 | . | 170 | . | . | . | . | . | . | . | . | . | 180 | . | . | . | . | . | . | . | . | . | 190 | . | . | . | . | . | . | . | . | . | 200 | . | . | . | . | . | . | . | . | . | 210 |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|