Job Description P27250 Confidence 100.00% Date Thu Jan 5 11:43:30 GMT 2012 Rank 29 Aligned Residues 332 % Identity 21% Template c3ip1C_ PDB info PDB header:oxidoreductase Chain: C: PDB Molecule:alcohol dehydrogenase, zinc-containing; PDBTitle: structure of putative alcohol dehydrogenase (tm_042) from thermotoga2 maritima Resolution 2.09 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		3	.	.	.	.	.	.	10				.	.	.	.																									.	.	.	.	.	20	.	.	.	.	.		.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50
Predicted Secondary structure										.	.	.					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.												.																										.	.	.	.
Query SS confidence										.	.	.					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.												.																										.	.	.	.
Query Sequence		M	I	K	S	Y	A	A	K	.	.	.	E	A	G	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	E	L	E	V	Y	E	Y	D	P	G	E	.	L	R	P	Q	D	V	E	V	Q	V	D	Y	C	G	I	C	H	S	D	L	S	M	I	D	N	.	.	.	.
Query Conservation										.	.	.					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.												.																										.	.	.	.
Alig confidence										.	.	.					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.												.																										.	.	.	.
Template Conservation
Template Sequence		S	L	R	A	V	R	L	H	A	K	W	D	P	R	P	E	F	K	L	G	P	K	D	I	E	G	K	L	T	W	L	G	S	K	V	W	R	Y	P	E	V	R	V	E	E	V	P	E	P	R	I	E	K	P	T	E	I	I	I	K	V	K	A	C	G	I	C	G	S	D	V	H	X	A	Q	T	D	E	E	G
Template Known Secondary structure																T	T					T	T		B	T	T	T	B	B	S		G	G	G	T																		S	T	T																					B		T	T	S
Template Predicted Secondary structure
Template SS confidence
		0	.	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.
					51	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.					.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.
Predicted Secondary structure		.	.	.																													.	.	.	.
Query SS confidence		.	.	.																													.	.	.	.
Query Sequence		.	.	.	E	W	G	F	S	Q	Y	P	L	V	A	G	H	E	V	I	G	R	V	V	A	L	G	S	A	A	Q	D	.	.	.	.	K	G	L	Q	V	G	Q	R	V	G	I	G	W	T	A	R	S	C	G	H	C	D	A	C	I	S	G	N	Q	I	N	C	E	Q	G	A	V	P	T	I	M	N	R	G	G
Query Conservation		.	.	.																													.	.	.	.
Alig confidence		.	.	.																													.	.	.	.														.
Template Conservation																																																		.
Template Sequence		Y	I	L	Y	P	G	L	T	G	F	P	V	T	L	G	H	E	F	S	G	V	V	V	E	A	G	P	E	A	I	N	R	R	T	N	K	R	F	E	I	G	E	P	V	C	A	E	E	.	X	L	W	C	G	H	C	R	P	C	A	E	G	F	P	N	H	C	E	N	L	N	E	L	G	F	N	V	D	G	A
Template Known Secondary structure		B	B	S			S		B		S	S																T	T				T	T	T	T					T	T							S	.					S		S					T	T		G	G	G		T	T				B	T	T	T	B			S
Template Predicted Secondary structure																																																		.
Template SS confidence
		80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.		.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.
		124	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.										.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.
Predicted Secondary structure																																				.	.	.	.	.	.	.	.	.
Query SS confidence																																				.	.	.	.	.	.	.	.	.
Query Sequence		F	A	E	K	L	R	A	D	W	Q	W	V	I	P	L	P	E	N	I	D	I	E	S	A	G	P	L	L	C	G	G	I	T	V	.	.	.	.	.	.	.	.	.	F	K	P	L	L	M	H	H	I	T	A	T	S	R	V	G	V	I	G	I	G	G	L	G	H	I	A	I	K	L	L	H	A	M	G	C	E
Query Conservation																																				.	.	.	.	.	.	.	.	.
Alig confidence																																				.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		F	A	E	Y	V	K	V	D	A	K	Y	A	W	S	L	R	E	L	E	G	V	Y	E	G	D	R	L	F	L	A	G	S	L	V	E	P	T	S	V	A	Y	N	A	V	I	V	R	G	G	G	I	R	P	G	D	N	V	V	I	L	G	G	G	P	I	G	L	A	A	V	A	I	L	K	H	A	G	A	S	K
Template Known Secondary structure		S	B	S						G	G	G					G	G	G	T	T	T	S		T	T								T												T	T	T	T					T	T									S													T	T		S
Template Predicted Secondary structure
Template SS confidence
		159	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.
		195	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.						.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.						.	.	.	260	.	.	.	.
Predicted Secondary structure																																.	.	.	.	.																																	.	.	.	.	.
Query SS confidence																																.	.	.	.	.																																	.	.	.	.	.
Query Sequence		V	T	A	F	S	S	N	P	A	K	E	Q	E	V	L	A	M	G	A	D	K	V	V	N	S	R	D	P	Q	A	.	.	.	.	.	L	K	A	L	A	G	Q	F	D	L	I	I	N	T	V	N	V	S	L	D	W	Q	P	Y	F	E	A	L	T	Y	G	G	.	.	.	.	.	N	F	H	T	V	G	A	V
Query Conservation																																.	.	.	.	.																																	.	.	.	.	.
Alig confidence																																.	.	.	.	.																																	.	.	.	.	.
Template Conservation
Template Sequence		V	I	L	S	E	P	S	E	V	R	R	N	L	A	K	E	L	G	A	D	H	V	I	D	P	T	K	E	N	F	V	E	A	V	L	D	Y	T	N	G	L	G	A	K	L	F	L	E	A	T	G	V	P	Q	L	V	W	P	Q	I	E	E	V	I	W	R	A	R	G	I	N	A	T	V	A	I	V	A	R	A
Template Known Secondary structure							S												T		S					T	T	T	S										T	T	T				S						S	S																	S										S
Template Predicted Secondary structure
Template SS confidence
		239	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.
		265	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.		290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.			.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.
Predicted Secondary structure																											.																	.	.
Query SS confidence																											.																	.	.
Query Sequence		L	T	P	L	S	V	P	A	F	T	L	I	A	G	D	R	S	V	S	G	S	A	T	G	T	.	P	Y	E	L	R	K	L	M	R	F	A	A	R	S	K	V	.	.	A	P	T	T	E	L	F	P	M	S	K	I	N	D	A	I	Q	H	V	R	D	G	K	A	R	Y	R	V	V	L
Query Conservation																											.																	.	.
Alig confidence																											.																	.	.
Template Conservation
Template Sequence		D	A	K	I	P	L	T	G	E	V	F	Q	V	R	R	A	Q	I	V	G	S	Q	G	H	S	G	H	G	T	F	P	R	V	I	S	L	X	A	S	G	X	D	X	T	K	I	I	S	K	T	V	S	X	E	E	I	P	E	Y	I	K	R	L	Q	T	D	K	S	L	V	K	V	T	X
Template Known Secondary structure			S												T	T											S	T	T											T	T			G	G	G	G							G	G	G								T	T	T		T	T		S
Template Predicted Secondary structure
Template SS confidence
		319	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions