Job Description P27250 Confidence 100.00% Date Thu Jan 5 11:43:30 GMT 2012 Rank 42 Aligned Residues 294 % Identity 19% Template c3gohA_ PDB info PDB header:oxidoreductase Chain: A: PDB Molecule:alcohol dehydrogenase, zinc-containing; PDBTitle: crystal structure of alcohol dehydrogenase superfamily protein2 (np_718042.1) from shewanella oneidensis at 1.55 a resolution Resolution 1.55 Å

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		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80
Predicted Secondary structure
Query SS confidence
Query Sequence		M	S	M	I	K	S	Y	A	A	K	E	A	G	G	E	L	E	V	Y	E	Y	D	P	G	E	L	R	P	Q	D	V	E	V	Q	V	D	Y	C	G	I	C	H	S	D	L	S	M	I	D	N	E	W	G	F	S	Q	Y	P	L	V	A	G	H	E	V	I	G	R	V	V	A	L	G	S	A	A	Q	D	K	G
Query Conservation
Alig confidence																																																																														.	.
Template Conservation																																																																														.	.
Template Sequence		X	E	Q	H	Q	V	W	A	Y	Q	T	K	T	H	S	V	T	L	N	S	V	D	I	P	A	L	A	A	D	D	I	L	V	Q	N	Q	A	I	G	I	N	P	V	D	W	K	F	I	K	A	N	P	I	N	W	S	N	G	H	V	P	G	V	D	G	A	G	V	I	V	K	V	G	A	K	V	.	.	D	S
Template Known Secondary structure												T	T	T	T														T	T																							T	T				T	T					S											T	T	S	.	.		G
Template Predicted Secondary structure																																																																														.	.
Template SS confidence
		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.			.	.
		81	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160
Predicted Secondary structure
Query SS confidence
Query Sequence		L	Q	V	G	Q	R	V	G	I	G	W	T	A	R	S	C	G	H	C	D	A	C	I	S	G	N	Q	I	N	C	E	Q	G	A	V	P	T	I	M	N	R	G	G	F	A	E	K	L	R	A	D	W	Q	W	V	I	P	L	P	E	N	I	D	I	E	S	A	G	P	L	L	C	G	G	I	T	V	F	K	P
Query Conservation
Alig confidence																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		K	X	L	G	R	R	V	A	Y	H	T	S	L	K	R	H	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	S	F	A	E	F	T	V	L	N	T	D	R	V	X	T	L	P	D	N	L	S	F	E	R	A	A	A	L	P	C	P	L	L	T	A	W	Q	A
Template Known Secondary structure		G	G	T	T									T	T	S		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.		S	S	B	S						T	T	S						T	T	S							T	S
Template Predicted Secondary structure																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		79	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.																										.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.
		161	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240
Predicted Secondary structure
Query SS confidence
Query Sequence		L	L	M	H	H	I	T	A	T	S	R	V	G	V	I	G	I	G	G	L	G	H	I	A	I	K	L	L	H	A	M	G	C	E	V	T	A	F	S	S	N	P	A	K	E	Q	E	V	L	A	M	G	A	D	K	V	V	N	S	R	D	P	Q	A	L	K	A	L	A	G	Q	F	D	L	I	I	N	T	V	N
Query Conservation
Alig confidence																																									.																			.	.	.	.	.
Template Conservation																																									.																			.	.	.	.	.
Template Sequence		F	E	K	I	P	L	T	K	Q	R	E	V	L	I	V	G	F	G	A	V	N	N	L	L	T	Q	X	L	N	N	A	G	Y	V	V	D	L	V	S	.	A	S	L	S	Q	A	L	A	A	K	R	G	V	R	H	L	Y	R	.	.	.	.	.	E	P	S	Q	V	T	Q	K	Y	F	A	I	F	D	A	A	L
Template Known Secondary structure			T	T	S				S										S														T								.	S	S										T						S	.	.	.	.	.	S	G	G	G			S									T	T
Template Predicted Secondary structure																																									.																			.	.	.	.	.
Template SS confidence
		134	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.		.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190						.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.
		241	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.		.	.	310	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																																					.
Query SS confidence																																																																					.
Query Sequence		V	S	L	D	W	Q	P	Y	F	E	A	L	T	Y	G	G	N	F	H	T	V	G	A	V	L	T	P	L	S	V	P	A	F	T	L	I	A	G	D	R	S	V	S	G	S	A	T	G	T	P	Y	E	L	R	K	L	M	R	F	A	A	R	S	K	V	A	P	.	T	T	E	L	F	P	M	S	K	I	N	D
Query Conservation																																																																					.
Alig confidence		.	.	.	.	.	.	.	.																																																												.
Template Conservation		.	.	.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	.	.	V	P	S	L	K	A	N	G	H	I	I	C	I	Q	D	R	R	T	I	S	Y	H	E	I	A	L	G	A	L	H	D	F	G	D	R	Q	D	W	Q	I	L	X	Q	Q	G	E	A	L	L	T	L	I	A	Q	G	K	X	E	I	A	A	P	D	I	F	R	F	E	Q	X	I	E
Template Known Secondary structure		.	.	.	.	.	.	.	.	G	G	G																S							G	G	G																										T	T	S	S										G	G	G
Template Predicted Secondary structure		.	.	.	.	.	.	.	.
Template SS confidence
										215	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.
		320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	I	Q	H	V	R	D	G	K	A	R	Y	R	V	V	L
Query Conservation
Alig confidence
Template Conservation
Template Sequence		A	L	D	H	S	E	Q	T	K	L	K	T	V	L	T	L
Template Known Secondary structure																	S
Template Predicted Secondary structure
Template SS confidence
		297	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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