Return to main results Retrieve Phyre Job Id

Job DescriptionP27250
Confidence59.47%DateThu Jan 5 11:43:30 GMT 2012
Rank140Aligned Residues131
% Identity15%Templatec2z2vA_
PDB info PDB header:oxidoreductaseChain: A: PDB Molecule:hypothetical protein ph1688; PDBTitle: crystal structure of l-lysine dehydrogenase from2 hyperthermophilic archaeon pyrococcus horikoshii
Resolution2.44 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   171........180.........190.........200.........210.........220.........230.........240.........250
Predicted Secondary structure 



























Query SS confidence 















































































Query Sequence  RVGVIGIGGLGHIAIKLLHAMGCEVTAFSSNPAKEQEVLAMGADKVVNSRDPQALKALAGQFDLIINTVNVSLDWQPYFE
Query Conservation   
           
          
                
 
 


                                
Alig confidence 



















.


























































Template Conservation 

 
 
 
  
      
  .                          
              
 

   
          
Template Sequence  KVLILGAGNIGRAIAWDLKD. EFDVYIGDVNNENLEKVKEFATPLKVDASNFDKLVEVMKEFELVIGALPGFLGFKSIKA
Template Known Secondary structure 

STT.TSS
TTTS

TT
TT
S



Template Predicted Secondary structure 


.























Template SS confidence 















































































   2.......10.........20. ........30.........40.........50.........60.........70.........80
 
   251........260.........270.........280.........290.........300..
Predicted Secondary structure 




















Query SS confidence 



















































Query Sequence  ALTYGGNFHTVGAVLTPLSVPAFTLIAGDRSVSGSATGTPYELRKLMRFAAR
Query Conservation                                 
 
              

  
Alig confidence 



















































Template Conservation      
  


 
        
   
      

   
  

 
 

      
Template Sequence  AIKSKVDMVDVSFMPENPLELRDEAEKAQVTIVFDAGFAPGLSNILMGRIFQ
Template Known Secondary structure  TT





SS
GGGGTT

S
BTTTB
Template Predicted Secondary structure 
















Template SS confidence 



















































   81........90.........100.........110.........120.........130..
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions