Phyre 2 alignment of P27250 with c2vz8B

Job Description P27250
Confidence 99.75% Date Thu Jan 5 11:43:30 GMT 2012

Rank 87 Aligned Residues 285

% Identity 19% Template c2vz8B_

PDB info PDB header:transferase Chain: B: PDB Molecule:fatty acid synthase; PDBTitle: crystal structure of mammalian fatty acid synthase

Resolution 3.2 Å

	Insertion relative to template
	Deletion relative to template
	Catalytic residue from the CSA

Detailed help on interpreting your alignment

	22	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.
Predicted Secondary structure
Query SS confidence
Query Sequence	D	P	G	E	L	R	P	Q	D	V	E	V	Q	V	D	Y	C	G	I	C	H	S	D	L	S	M	I	D	N	E	W	G	F	S	Q	Y	P	L	V	A	G	H	E	V	I	G	R	V	V	A	L	G	S	A	A	Q	D	K	G	L	Q	V	G	Q	R	V	G	I	G	W	T	A	R	S	C	G	H	C	D	A
Query Conservation
Alig confidence																																				.	.	.	.																		.													.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																				.	.	.	.																		.													.	.	.	.	.	.	.	.	.	.	.
Template Sequence	Y	A	L	P	A	S	C	Q	D	R	L	C	S	V	Y	Y	T	S	L	N	F	R	D	V	M	L	A	T	G	K	L	S	P	D	S	.	.	.	.	I	P	G	K	W	L	T	R	D	C	M	L	G	M	E	F	S	.	G	R	D	A	S	G	R	R	V	M	G	M	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure	G				T	T	S	T	T	T																			T	S	S		G	G	G	.	.	.	.			S			S		S	S									.				T	T								.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																				.	.	.	.																		.													.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
	1553	.	.	.	.	.	.	1560	.	.	.	.	.	.	.	.	.	1570	.	.	.	.	.	.	.	.	.	1580	.	.	.	.	.	.	.					.	.	1590	.	.	.	.	.	.	.	.	.	1600	.	.	.	.		.	.	.	.	.	1610	.	.	.	.	.	.

	102	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160			.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																												.	.
Query SS confidence																																																												.	.
Query Sequence	C	I	S	G	N	Q	I	N	C	E	Q	G	A	V	P	T	I	M	N	R	G	G	F	A	E	K	L	R	A	D	W	Q	W	V	I	P	L	P	E	N	I	D	I	E	S	A	G	P	L	L	C	G	G	I	T	V	F	K	P	.	.	L	L	M	H	H	I	T	A	T	S	R	V	G	V	I	G	I	G	G
Query Conservation																																																												.	.
Alig confidence	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																											.	.
Template Conservation	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	V	P	A	E	G	L	A	T	S	V	L	L	L	Q	H	A	T	W	E	V	P	S	T	W	T	L	E	E	A	A	S	V	P	I	V	Y	T	T	A	Y	Y	S	L	V	V	R	G	R	M	Q	P	G	E	S	V	L	I	H	S	G	S	G	G
Template Known Secondary structure	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.		S	S			S	B	S						G	G	G						T	T	S						T	T													T	T	T	T				T	T								S	S	S
Template Predicted Secondary structure	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
																		1617	.	.	1620	.	.	.	.	.	.	.	.	.	1630	.	.	.	.	.	.	.	.	.	1640	.	.	.	.	.	.	.	.	.	1650	.	.	.	.	.	.	.	.	.	1660	.	.	.	.	.	.	.	.	.	1670	.	.	.	.	.	.	.	.	.

	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210					.	.	.	.	.	.	.	.	.	220	.	.	.	.	.					.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.
Predicted Secondary structure																																.	.	.	.																.	.	.	.
Query SS confidence																																.	.	.	.																.	.	.	.
Query Sequence	L	G	H	I	A	I	K	L	L	H	A	M	G	C	E	V	T	A	F	S	S	N	P	A	K	E	Q	E	V	L	A	.	.	.	.	M	G	A	D	K	V	V	N	S	R	D	P	Q	A	L	.	.	.	.	K	A	L	A	G	Q	F	D	L	I	I	N	T	V	N	V	S	L	D	W	Q	P	Y	F	E	A
Query Conservation																																.	.	.	.																.	.	.	.
Alig confidence																																.	.	.	.																.	.	.	.
Template Conservation
Template Sequence	V	G	Q	A	A	I	A	I	A	L	S	R	G	C	R	V	F	T	T	V	G	S	A	E	K	R	A	Y	L	Q	A	R	F	P	Q	L	D	E	T	C	F	A	N	S	R	D	T	S	F	E	Q	H	V	L	R	H	T	A	G	K	G	V	D	L	V	L	N	S	L	A	E	E	K	L	Q	A	S	V	R	C
Template Known Secondary structure												T	T								S													T	T			S	T	T				S	S	S	S									T	T	T	T																				T	T
Template Predicted Secondary structure
Template SS confidence
	1680	.	.	.	.	.	.	.	.	.	1690	.	.	.	.	.	.	.	.	.	1700	.	.	.	.	.	.	.	.	.	1710	.	.	.	.	.	.	.	.	.	1720	.	.	.	.	.	.	.	.	.	1730	.	.	.	.	.	.	.	.	.	1740	.	.	.	.	.	.	.	.	.	1750	.	.	.	.	.	.	.	.	.

	252	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.		.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.										290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.		.	310	.	.	.	.	.	.	.	.	.	320
Predicted Secondary structure																	.																							.	.	.	.	.	.	.	.	.																				.
Query SS confidence																	.																							.	.	.	.	.	.	.	.	.																				.
Query Sequence	L	T	Y	G	G	N	F	H	T	V	G	A	V	L	T	P	.	L	S	V	P	A	F	T	L	I	A	G	D	R	S	V	S	G	S	A	T	G	T	.	.	.	.	.	.	.	.	.	P	Y	E	L	R	K	L	M	R	F	A	A	R	S	K	V	A	P	T	.	T	E	L	F	P	M	S	K	I	N	D	A
Query Conservation																	.																							.	.	.	.	.	.	.	.	.																				.
Alig confidence																	.																							.	.	.	.	.	.	.	.	.																				.
Template Conservation
Template Sequence	L	A	Q	H	G	R	F	L	E	I	G	K	F	D	L	S	N	N	H	A	L	G	M	A	V	F	L	K	N	V	T	F	H	G	I	L	L	D	S	L	F	E	E	G	G	A	T	W	Q	E	V	S	E	L	L	K	A	G	I	Q	E	G	V	V	Q	P	L	K	C	T	V	F	P	R	T	K	V	E	A	A
Template Known Secondary structure																	T	T					T	T	G	G	G	G	T								T					T	S																	T	T	T		S										S	S	T
Template Predicted Secondary structure
Template SS confidence
	1760	.	.	.	.	.	.	.	.	.	1770	.	.	.	.	.	.	.	.	.	1780	.	.	.	.	.	.	.	.	.	1790	.	.	.	.	.	.	.	.	.	1800	.	.	.	.	.	.	.	.	.	1810	.	.	.	.	.	.	.	.	.	1820	.	.	.	.	.	.	.	.	.	1830	.	.	.	.	.	.	.	.	.

	321	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence	I	Q	H	V	R	D	G	K	A	R	Y	R	V	V	L	K	A	D	F
Query Conservation
Alig confidence
Template Conservation
Template Sequence	F	R	Y	M	A	Q	G	K	H	I	G	K	V	V	I	Q	V	R	E
Template Known Secondary structure						T	T			S	S						S	S
Template Predicted Secondary structure
Template SS confidence
	1840	.	.	.	.	.	.	.	.	.	1850	.	.	.	.	.	.	.	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server

Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]

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Lawrence Kelley, Benjamin Jefferys
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