Job Description P27250 Confidence 100.00% Date Thu Jan 5 11:43:30 GMT 2012 Rank 35 Aligned Residues 328 % Identity 16% Template c2vwpA_ PDB info PDB header:oxidoreductase Chain: A: PDB Molecule:glucose dehydrogenase; PDBTitle: haloferax mediterranei glucose dehydrogenase in complex2 with nadph and zn. Resolution 2.01 Å

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		4	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.				.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80
Predicted Secondary structure																																																						.	.	.
Query SS confidence																																																						.	.	.
Query Sequence		I	K	S	Y	A	A	K	E	A	G	G	E	L	E	V	Y	E	Y	D	P	G	E	L	R	P	Q	D	V	E	V	Q	V	D	Y	C	G	I	C	H	S	D	L	S	M	I	D	N	E	W	G	F	S	.	.	.	Q	Y	P	L	V	A	G	H	E	V	I	G	R	V	V	A	L	G	S	A	A	Q	D	K	G
Query Conservation																																																						.	.	.
Alig confidence																																																						.	.	.																					.	.	.	.
Template Conservation																																																																													.	.	.	.
Template Sequence		M	K	A	I	A	V	K	R	G	E	D	R	P	V	V	I	E	K	P	R	P	E	P	E	S	G	E	A	L	V	R	T	L	R	V	G	V	D	G	T	D	H	E	V	I	A	G	G	H	G	G	F	P	E	G	E	D	H	L	V	L	G	H	E	A	V	G	V	V	V	D	P	N	D	T	.	.	.	.	E
Template Known Secondary structure									T	T			S													T	T																					T		T	T	S	S		T	T		S																T	T	S	.	.	.	.	S
Template Predicted Secondary structure																																																																													.	.	.	.
Template SS confidence
		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.					.
		81	.	.	.	.	.	.	.	.	90	.		.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.				.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.
Predicted Secondary structure													.																										.	.	.
Query SS confidence													.																										.	.	.
Query Sequence		L	Q	V	G	Q	R	V	G	I	G	W	.	T	A	R	S	C	G	H	C	D	A	C	I	S	G	N	Q	I	N	C	E	Q	G	A	V	P	.	.	.	T	I	M	N	R	G	G	F	A	E	K	L	R	A	D	W	Q	W	V	I	P	L	P	E	N	I	D	I	E	S	A	G	P	L	L	C	G	G	I	T
Query Conservation													.																										.	.	.
Alig confidence													.																										.	.	.
Template Conservation
Template Sequence		L	E	E	G	D	I	V	V	P	T	V	R	R	P	P	A	S	G	T	N	E	Y	F	E	R	D	Q	P	D	M	A	P	D	G	M	Y	F	E	R	G	I	V	G	A	H	G	Y	M	S	E	F	F	T	S	P	E	K	Y	L	V	R	I	P	R	S	Q	A	E	L	G	F	L	I	E	P	I	S	I	T	E
Template Known Secondary structure				T	T							S					T	T								T	T		G	G	G			T	T	S					T	T	B					S		B	S						G	G	G						G	G	G	S	T	T	G	G	G
Template Predicted Secondary structure
Template SS confidence
		77	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.
		157	.	.	160	.					.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.							.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.
Predicted Secondary structure							.	.	.	.																																.	.	.	.	.	.
Query SS confidence							.	.	.	.																																.	.	.	.	.	.
Query Sequence		V	F	K	P	L	.	.	.	.	L	M	H	H	I	T	A	T	S	R	V	G	V	I	G	I	G	G	L	G	H	I	A	I	K	L	L	H	A	M	G	.	.	.	.	.	.	C	E	V	T	A	F	S	S	N	P	A	K	E	Q	E	V	L	A	M	G	A	D	K	V	V	N	S	R	D	P	Q	A	L	K
Query Conservation							.	.	.	.																																.	.	.	.	.	.
Alig confidence							.	.	.	.																																.	.	.	.	.	.
Template Conservation
Template Sequence		K	A	L	E	H	A	Y	A	S	R	S	A	F	D	W	D	P	S	S	A	F	V	L	G	N	G	S	L	G	L	L	T	L	A	M	L	K	V	D	D	K	G	Y	E	N	L	Y	C	L	G	R	R	D	R	P	D	P	T	I	D	I	I	E	E	L	D	A	T	Y	V	D	S	R	Q	T	P	V	E	D	V
Template Known Secondary structure											T	T	T	S													S														T	T			S										S	S										T	T						T	T	T	S		G	G	G
Template Predicted Secondary structure
Template SS confidence
		157	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.
		227	.	.	230	.	.	.	.	.	.	.	.	.	240	.		.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.						.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.		.	.	.	.	.	.
Predicted Secondary structure																	.																											.	.	.	.	.																											.
Query SS confidence																	.																											.	.	.	.	.																											.
Query Sequence		A	L	A	G	Q	F	D	L	I	I	N	T	V	N	V	.	S	L	D	W	Q	P	Y	F	E	A	L	T	Y	G	G	N	F	H	T	V	G	A	V	L	T	P	.	.	.	.	.	L	S	V	P	A	F	T	L	I	A	G	D	R	S	V	S	G	S	A	T	G	T	P	Y	E	L	.	R	K	L	M	R	F
Query Conservation																	.																											.	.	.	.	.																											.
Alig confidence																	.																											.	.	.	.	.																											.
Template Conservation
Template Sequence		P	D	V	Y	E	Q	M	D	F	I	Y	E	A	T	G	F	P	K	H	A	I	Q	S	V	Q	A	L	A	P	N	G	V	G	A	L	L	G	V	P	S	D	W	A	F	E	V	D	A	G	A	F	H	R	E	M	V	L	H	N	K	A	L	V	G	S	V	N	S	H	V	E	H	F	E	A	A	T	V	T	F
Template Known Secondary structure					T										S																																												T	T
Template Predicted Secondary structure
Template SS confidence
		237	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.
		300	.	.	.	.	.	.	.				.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.
Predicted Secondary structure										.	.	.
Query SS confidence										.	.	.
Query Sequence		A	A	R	S	K	V	A	P	.	.	.	T	T	E	L	F	P	M	S	K	I	N	D	A	I	Q	H	V	R	D	G	K	A	R	Y	R	V	V	L	K	A	D
Query Conservation										.	.	.
Alig confidence										.	.	.																.	.	.
Template Conservation																												.	.	.
Template Sequence		T	K	L	P	K	W	F	L	E	D	L	V	T	G	V	H	P	L	S	E	F	E	A	A	F	D	.	.	.	D	D	D	T	T	I	K	T	A	I	E	F	S
Template Known Secondary structure				S															G	G	G	G	G	G	G	G		.	.	.		S	T	T
Template Predicted Secondary structure																												.	.	.
Template SS confidence
		317	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.				.	.	.	.	.	.	.	350	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions