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Job DescriptionP27250
Confidence100.00%DateThu Jan 5 11:43:30 GMT 2012
Rank20Aligned Residues331
% Identity21%Templatec2eihA_
PDB info PDB header:oxidoreductaseChain: A: PDB Molecule:alcohol dehydrogenase; PDBTitle: crystal structure of nad-dependent alcohol dehydrogenase
Resolution2.30 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   4.....10..... ....20.........30.........40.........50..... ....60.........70.........80
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Query Sequence  IKSYAAKEAGGE. . LEVYEYDPGELRPQDVEVQVDYCGICHSDLSMIDNEWGFS. QYPLVAGHEVIGRVVALGSAAQDKG
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Template Sequence  MRAVVMRARGGPEVLEVADLPVPEPGPKEVRVRLKAAALNHLDVWVRKGVASPKLPLPHVLGADGSGVVDAVGPGV. . EG
Template Known Secondary structure 

SSSSGGG






TT

TSSSTT

SS

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   1........10.........20.........30.........40.........50.........60.........70...... ..
 
   81........90.........100.........110.........120.........130.........140.........150.........160
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Query Sequence  LQVGQRVGIGWTARSCGHCDACISGNQINCEQGAVPTIMNRGGFAEKLRADWQWVIPLPENIDIESAGPLLCGGITVFKP
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Template Sequence  FAPGDEVVIN. PGLSCGRCERCLAGEDNLCPRYQILGEHRHGTYAEYVVLPEANLAPKPKNLSFEEAAAIPLTFLTAWQM
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TT

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SSBSGGG

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   7980........ .90.........100.........110.........120.........130.........140.........150.......
 
   161........170....... ..180.........190.........200.........210.........220........ .230...
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Query Sequence  LLMHHITATSRVGVIGI. . GGLGHIAIKLLHAMGCEVTAFSSNPAKEQEVLAMGADKVVNSRDPQALKAL. . . . . AGQFD
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Template Sequence  VVDKLGVRPGDDVLVMAAGSGVSVAAIQIAKLFGARVIATAGSEDKLRRAKALGADETVNYTHPDWPKEVRRLTGGKGAD
Template Known Secondary structure  TTTS


TT

STTSTTTT
SST
STTSTTTTTT
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   158.160.........170.........180.........190.........200.........210.........220.........230.......
 
   234.....240.........250.........260.........270.........280.........290.........300....... ..310..
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Query Sequence  LIINTVNVSLDWQPYFEALTYGGNFHTVGAVLTPLSVPAFTLIAGDRSVSGSATGTPYELRKLMRFAARSKVAP. TTELF
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Template Sequence  KVVDHTGALYFEGVIKATANGGRIAIAGASSGYEGTLPFAHVFYRQLSILGSTMASKSRLFPILRFVEEGKLKPVVGQVL
Template Known Secondary structure  SS
SSSSS


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TTTT


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GGGTSS


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   238.240.........250.........260.........270.........280.........290.........300.........310.......
 
   313......320.........330.......
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Query Sequence  PMSKINDAIQHVRDGKARYRVVLKA
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Template Sequence  PLEAAAEGHRLLEERRVFGKVVLQV
Template Known Secondary structure  GGGTT
SSS
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   318.320.........330.........340..
 
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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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