Return to main results Retrieve Phyre Job Id

Job DescriptionP27250
Confidence53.75%DateThu Jan 5 11:43:30 GMT 2012
Rank144Aligned Residues116
% Identity13%Templatec2axqA_
PDB info PDB header:oxidoreductaseChain: A: PDB Molecule:saccharopine dehydrogenase; PDBTitle: apo histidine-tagged saccharopine dehydrogenase (l-glu2 forming) from saccharomyces cerevisiae
Resolution1.70 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   168.170.........180.........190.........200.........210 ....... ..220.........230.........240.....
Predicted Secondary structure 













.



.












Query SS confidence 










































.






.



























Query Sequence  ATSRVGVIGIGGLGHIAIKLLHAMGCEVTAFSSNPAKEQEVLA. MGADKVV. NSRDPQALKALAGQFDLIINTVNVSLDW
Query Conservation      
           
          
               . 
 
 

.
                           
Alig confidence 










































.






.



























Template Conservation   


 




  
      
       
 

 
                   
      
       



   
     
Template Sequence  GKNVLLLGSGFVAQPVIDTLAANDDINVTVACRTLANAQALAKPSGSKAISLDVTDDSALDKVLADNDVVISLIPYTFHP
Template Known Secondary structure 


STTTSTTSSGGGT


TT
TSS
S
GGG
Template Predicted Secondary structure 




























Template SS confidence 















































































   2.......10.........20.........30.........40.........50.........60.........70.........80.
 
   246...250.........260.........270.........280...
Predicted Secondary structure 
















Query SS confidence 





































Query Sequence  QPYFEALTYGGNFHTVGAVLTPLSVPAFTLIAGDRSVS
Query Conservation                                      
 
Alig confidence 





































Template Conservation   
       
 
 

 
        
   

  

  
Template Sequence  NVVKSAIRTKTDVVTSSYISPALRELEPEIVKAGITVM
Template Known Secondary structure  T

S


T
Template Predicted Secondary structure 










Template SS confidence 





































   82.......90.........100.........110.........
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions