Job Description P27250 Confidence 100.00% Date Thu Jan 5 11:43:30 GMT 2012 Rank 52 Aligned Residues 308 % Identity 19% Template c1yb5A_ PDB info PDB header:oxidoreductase Chain: A: PDB Molecule:quinone oxidoreductase; PDBTitle: crystal structure of human zeta-crystallin with bound nadp Resolution 1.85 Å

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		2	.	.	.	.	.	.	.	10	.	.	.	.	.			.	.	.		.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.		.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.
Predicted Secondary structure																.	.				.																																						.
Query SS confidence																.	.				.																																						.
Query Sequence		S	M	I	K	S	Y	A	A	K	E	A	G	G	E	.	.	L	E	V	.	Y	E	Y	D	P	G	E	L	R	P	Q	D	V	E	V	Q	V	D	Y	C	G	I	C	H	S	D	L	S	M	I	D	N	E	W	G	F	S	.	Q	Y	P	L	V	A	G	H	E	V	I	G	R	V	V	A	L	G	S	A	A	Q
Query Conservation																.	.				.																																						.
Alig confidence																.	.				.																																						.																						.
Template Conservation																																																																																	.
Template Sequence		K	L	M	R	A	V	R	V	F	E	F	G	G	P	E	V	L	K	L	R	S	D	I	A	V	P	I	P	K	D	H	Q	V	L	I	K	V	H	A	C	G	V	N	P	V	E	T	Y	I	R	S	G	T	Y	S	R	K	P	L	L	P	Y	T	P	G	S	D	V	A	G	V	I	E	A	V	G	D	N	A	.
Template Known Secondary structure										S	S		S	S	G	G	G														T	T																					T		S	S					S	S	B				S											T	T		.
Template Predicted Secondary structure																																																																																	.
Template SS confidence
		6	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.
		78	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	K	G	L	Q	V	G	Q	R	V	G	I	G	W	T	A	R	S	C	G	H	C	D	A	C	I	S	G	N	Q	I	N	C	E	Q	G	A	V	P	T	I	M	N	R	G	G	F	A	E	K	L	R	A	D	W	Q	W	V	I	P	L	P	E	N	I	D	I	E	S	A	G	P	L	L	C	G	G	I	T	V
Query Conservation
Alig confidence		.																																																															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation		.																																																															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		.	S	A	F	K	K	G	D	R	V	F	T	S	S	T	I	S	G	G	Y	A	E	Y	A	L	A	A	D	H	T	V	Y	K	L	P	E	K	L	D	F	K	Q	G	A	A	I	G	I	P	Y	F	T	A	Y	R	A	L	I	H	S	A	C	V	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure		.	T	T			T	T						S			S	S		S	S	B	S						G	G	G						T	T	S						T	T	T													T	T	S			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure		.																																																															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
			85	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.
		158	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.					.	230	.	.	.
Predicted Secondary structure																																																																									.	.	.	.
Query SS confidence																																																																									.	.	.	.
Query Sequence		F	K	P	L	L	M	H	H	I	T	A	T	S	R	V	G	V	I	G	I	G	G	L	G	H	I	A	I	K	L	L	H	A	M	G	C	E	V	T	A	F	S	S	N	P	A	K	E	Q	E	V	L	A	M	G	A	D	K	V	V	N	S	R	D	P	Q	A	L	K	A	L	.	.	.	.	A	G	Q	F	D
Query Conservation																																																																									.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.																																																																.	.	.	.
Template Conservation		.	.	.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	.	.	K	A	G	E	S	V	L	V	H	G	A	S	G	G	V	G	L	A	A	C	Q	I	A	R	A	Y	G	L	K	I	L	G	T	A	G	T	E	E	G	Q	K	I	V	L	Q	N	G	A	H	E	V	F	N	H	R	E	V	N	Y	I	D	K	I	K	K	Y	V	G	E	K	G	I
Template Known Secondary structure		.	.	.	.	.	.	.	.		T	T							T		S	S													T	T								S	S										T	T		S					T	T	S	T	T											T	T
Template Predicted Secondary structure		.	.	.	.	.	.	.	.
Template SS confidence
										147	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.
		234	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.							290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.
Predicted Secondary structure																																																										.	.	.	.	.	.
Query SS confidence																																																										.	.	.	.	.	.
Query Sequence		L	I	I	N	T	V	N	V	S	L	D	W	Q	P	Y	F	E	A	L	T	Y	G	G	N	F	H	T	V	G	A	V	L	T	P	L	S	V	P	A	F	T	L	I	A	G	D	R	S	V	S	G	S	A	T	G	T	.	.	.	.	.	.	P	Y	E	L	R	K	L	M	R	F	A	A	R	S	K	V	A	P
Query Conservation																																																										.	.	.	.	.	.
Alig confidence																																			.																							.	.	.	.	.	.
Template Conservation																																			.
Template Sequence		D	I	I	I	E	M	L	A	N	V	N	L	S	K	D	L	S	L	L	S	H	G	G	R	V	I	V	V	G	S	R	G	T	.	I	E	I	N	P	R	D	T	M	A	K	E	S	S	I	I	G	V	T	L	F	S	S	T	K	E	E	F	Q	Q	Y	A	A	A	L	Q	A	G	M	E	I	G	W	L	K	P
Template Known Secondary structure							S																										S		.					T					T	T	T								G	G	G																				T
Template Predicted Secondary structure																																			.
Template SS confidence
		219	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.		.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.
			308	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.		.	330	.	.	.	.	.	.	.
Predicted Secondary structure		.																						.
Query SS confidence		.																						.
Query Sequence		.	T	T	E	L	F	P	M	S	K	I	N	D	A	I	Q	H	V	R	D	G	K	.	A	R	Y	R	V	V	L	K	A
Query Conservation		.																						.
Alig confidence		.																						.
Template Conservation
Template Sequence		V	I	G	S	Q	Y	P	L	E	K	V	A	E	A	H	E	N	I	I	H	G	S	G	A	T	G	K	M	I	L	L	L
Template Known Secondary structure									G	G	G											S	S			S	S
Template Predicted Secondary structure
Template SS confidence
		298	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions