Job Description P27250 Confidence 100.00% Date Thu Jan 5 11:43:30 GMT 2012 Rank 36 Aligned Residues 303 % Identity 21% Template c1xa0B_ PDB info PDB header:structural genomics, unknown function Chain: B: PDB Molecule:putative nadph dependent oxidoreductases; PDBTitle: crystal structure of mcsg target apc35536 from bacillus2 stearothermophilus Resolution 2.80 Å

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		2	.	.	.	.	.	.	.	10	.	.	.	.	.			.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																.	.
Query SS confidence																.	.
Query Sequence		S	M	I	K	S	Y	A	A	K	E	A	G	G	E	.	.	L	E	V	Y	E	Y	D	P	G	E	L	R	P	Q	D	V	E	V	Q	V	D	Y	C	G	I	C	H	S	D	L	S	M	I	D	N	E	W	G	F	S	Q	Y	P	L	V	A	G	H	E	V	I	G	R	V	V	A	L	G	S	A	A	Q	D	K
Query Conservation																.	.
Alig confidence																.	.																																																									.	.	.	.	.	.	.
Template Conservation																																																																										.	.	.	.	.	.	.
Template Sequence		S	A	F	Q	A	F	V	V	N	K	T	E	T	E	F	T	A	G	V	Q	T	I	S	X	D	D	L	P	E	G	D	V	L	V	R	V	H	Y	S	S	V	N	Y	K	D	G	L	A	S	I	P	D	G	K	I	V	K	T	P	F	V	P	G	I	D	L	A	G	V	V	V	S	.	.	.	.	.	.	.	S
Template Known Secondary structure													S	S											G	G	G	S				S																	T	T	S	S	S	S	T	T					B				S									.	.	.	.	.	.	.
Template Predicted Secondary structure																																																																										.	.	.	.	.	.	.
Template SS confidence
		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.								.
		80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	L	Q	V	G	Q	R	V	G	I	G	W	T	A	R	S	C	G	H	C	D	A	C	I	S	G	N	Q	I	N	C	E	Q	G	A	V	P	T	I	M	N	R	G	G	F	A	E	K	L	R	A	D	W	Q	W	V	I	P	L	P	E	N	I	D	I	E	S	A	G	P	L	L	C	G	G	I	T	V	F	K
Query Conservation
Alig confidence														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		Q	H	P	E	G	D	E	V	I	A	T	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	Y	E	I	G	V	T	H	F	G	G	Y	S	E	Y	A	R	L	H	G	E	W	L	V	P	L	P	K	G	L	T	L	K	E	A	X	A	I	G	T	A	G	F	T	A	A	L
Template Known Secondary structure		S											S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T	T	T	T	T	T	S			S	S	B	S						T	T	T						T	T
Template Predicted Secondary structure														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		76	.	.	.	80	.	.	.	.	.	.	.																							.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.
		160						.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.
Predicted Secondary structure			.	.	.	.	.
Query SS confidence			.	.	.	.	.
Query Sequence		P	.	.	.	.	.	L	L	M	H	H	I	T	A	T	S	R	V	G	V	I	G	I	G	G	L	G	H	I	A	I	K	L	L	H	A	M	G	C	E	V	T	A	F	S	S	N	P	A	K	E	Q	E	V	L	A	M	G	A	D	K	V	V	N	S	R	D	P	Q	A	L	K	A	L	A	G	Q	F	D	L
Query Conservation			.	.	.	.	.
Alig confidence			.	.	.	.	.																																																												.	.	.	.
Template Conservation																																																																			.	.	.	.
Template Sequence		S	I	H	R	L	E	E	H	G	L	T	P	E	R	G	P	V	L	V	T	G	A	T	G	G	V	G	S	L	A	V	S	X	L	A	K	R	G	Y	T	V	E	A	S	T	G	K	A	A	E	H	D	Y	L	R	V	L	G	A	K	E	V	L	A	E	.	.	.	.	R	I	R	P	L	D	K	Q	R	W	A
Template Known Secondary structure								T	T	T			G	G	G								T	T	S													T	T								S		G	G	G								T		S						.	.	.	.		S	S	S			S	S
Template Predicted Secondary structure																																																																			.	.	.	.
Template SS confidence
		137	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.					.	.	.	.	.	.	.	.	210	.	.
		235	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.		.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.		.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.					.
Predicted Secondary structure																																	.																					.																							.	.	.	.
Query SS confidence																																	.																					.																							.	.	.	.
Query Sequence		I	I	N	T	V	N	V	S	L	D	W	Q	P	Y	F	E	A	L	T	Y	G	G	N	F	H	T	V	G	A	V	L	.	T	P	L	S	V	P	A	F	T	L	I	A	G	D	R	S	V	S	G	S	.	A	T	G	T	P	Y	E	L	R	K	L	M	R	F	A	A	R	S	K	V	A	P	.	.	.	.	T
Query Conservation																																	.																					.																							.	.	.	.
Alig confidence																																	.																					.																							.	.	.	.
Template Conservation
Template Sequence		A	A	V	D	P	V	G	G	R	T	L	A	T	V	L	S	R	X	R	Y	G	G	A	V	A	V	S	G	L	T	G	G	A	E	V	P	T	T	V	H	P	F	I	L	R	G	V	S	L	L	G	I	D	S	V	Y	C	P	X	D	L	R	L	R	I	W	E	R	L	A	G	D	L	K	P	D	L	E	R	I
Template Known Secondary structure							S	T	T	T	T					G	G	G											S			S	S	S						S							T								S	T	T														T	T	T	T
Template Predicted Secondary structure
Template SS confidence
		219	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.
		309	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		T	E	L	F	P	M	S	K	I	N	D	A	I	Q	H	V	R	D	G	K	A	R	Y	R	V	V	L	K	A
Query Conservation
Alig confidence
Template Conservation
Template Sequence		A	Q	E	I	S	L	A	E	L	P	Q	A	L	K	R	I	L	R	G	E	L	R	G	R	T	V	V	R	L
Template Known Secondary structure							G	G	G										T	T				S
Template Predicted Secondary structure
Template SS confidence
		299	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions