Job Description P27250 Confidence 100.00% Date Thu Jan 5 11:43:30 GMT 2012 Rank 24 Aligned Residues 329 % Identity 22% Template c1p0fA_ PDB info PDB header:oxidoreductase Chain: A: PDB Molecule:nadp-dependent alcohol dehydrogenase; PDBTitle: crystal structure of the binary complex: nadp(h)-dependent vertebrate2 alcohol dehydrogenase (adh8) with the cofactor nadp Resolution 1.80 Å

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		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		M	I	K	S	Y	A	A	K	E	A	G	G	E	L	E	V	Y	E	Y	D	P	G	E	L	R	P	Q	D	V	E	V	Q	V	D	Y	C	G	I	C	H	S	D	L	S	M	I	D	N	E	W	G	F	S	Q	Y	P	L	V	A	G	H	E	V	I	G	R	V	V	A	L	G	S	A	A	Q	D	K	G	L	Q
Query Conservation
Alig confidence																																																				.																								.	.
Template Conservation																																																				.																								.	.
Template Sequence		T	C	K	A	A	V	A	W	E	P	H	K	P	L	S	L	E	T	I	T	V	A	P	P	K	A	H	E	V	R	I	K	I	L	A	S	G	I	C	G	S	D	S	S	V	L	K	E	I	I	.	P	S	K	F	P	V	I	L	G	H	E	A	V	G	V	V	E	S	I	G	A	G	V	.	.	T	C	V	K
Template Known Secondary structure								B	S	S	T	T	S														T	T																				T	T	S	S	.				S	S	B															T	T		.	.		S
Template Predicted Secondary structure																																																				.																								.	.
Template SS confidence
		1008	.	1010	.	.	.	.	.	.	.	.	.	1020	.	.	.	.	.	.	.	.	.	1030	.	.	.	.	.	.	.	.	.	1040	.	.	.	.	.	.	.	.	.	1050	.	.	.	.	.	.	.		.	.	1060	.	.	.	.	.	.	.	.	.	1070	.	.	.	.	.	.	.	.	.	1080			.	.	.	.
		83	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.																						120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.
Predicted Secondary structure																																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		V	G	Q	R	V	G	I	G	W	T	A	R	S	C	G	H	C	D	A	C	I	S	G	N	Q	I	N	C	E	Q	G	A	V	P	T	I	M	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	N	R	G	G	F	A	E	K	L	R	A	D	W	Q	W	V	I	P	L	P	E	N
Query Conservation																																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence							.																																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation							.
Template Sequence		P	G	D	K	V	.	I	P	L	F	V	P	Q	C	G	S	C	R	A	C	K	S	S	N	S	N	F	C	E	K	N	D	M	G	A	K	T	G	L	M	A	D	M	T	S	R	F	T	C	R	G	K	P	I	Y	N	L	M	G	T	S	T	F	T	E	Y	T	V	V	A	D	I	A	V	A	K	I	D	P	K
Template Known Secondary structure		T	T				.				S	S				S	S	S						T	T					T	T		S	T	T	T				S		T	T	S			S				T	T				B		S	T	T	T			S	B	S						T	T	S						T	T
Template Predicted Secondary structure							.
Template SS confidence
		1085	.	.	.	.		1090	.	.	.	.	.	.	.	.	.	1100	.	.	.	.	.	.	.	.	.	1110	.	.	.	.	.	.	.	.	.	1120	.	.	.	.	.	.	.	.	.	1130	.	.	.	.	.	.	.	.	.	1140	.	.	.	.	.	.	.	.	.	1150	.	.	.	.	.	.	.	.	.	1160	.	.	.
		142	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.		.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220
Predicted Secondary structure																																													.
Query SS confidence																																													.
Query Sequence		I	D	I	E	S	A	G	P	L	L	C	G	G	I	T	V	F	K	P	L	L	M	H	H	I	T	A	T	S	R	V	G	V	I	G	I	G	G	L	G	H	I	A	.	I	K	L	L	H	A	M	G	C	E	V	T	A	F	S	S	N	P	A	K	E	Q	E	V	L	A	M	G	A	D	K	V	V	N	S	R
Query Conservation																																													.
Alig confidence																																													.
Template Conservation
Template Sequence		A	P	L	E	S	C	L	I	G	C	G	F	A	T	G	Y	G	A	A	V	N	T	A	K	V	T	P	G	S	T	C	A	V	F	G	L	G	G	V	G	F	S	A	I	V	G	C	K	A	A	G	A	S	R	I	I	G	V	G	T	H	K	D	K	F	P	K	A	I	E	L	G	A	T	E	C	L	N	P	K
Template Known Secondary structure				G	G	G	G	G	G	G	T											T	T	T				T	T									S														T		S							S		G	G	G							T	T		S					G	G
Template Predicted Secondary structure
Template SS confidence
		1164	.	.	.	.	.	1170	.	.	.	.	.	.	.	.	.	1180	.	.	.	.	.	.	.	.	.	1190	.	.	.	.	.	.	.	.	.	1200	.	.	.	.	.	.	.	.	.	1210	.	.	.	.	.	.	.	.	.	1220	.	.	.	.	.	.	.	.	.	1230	.	.	.	.	.	.	.	.	.	1240	.	.	.
		221	.							.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.			.	.	.	.	.	.	.	280	.	.	.	.	.	.	.			.	.	290
Predicted Secondary structure				.	.	.	.	.	.																																																			.	.																.	.
Query SS confidence				.	.	.	.	.	.																																																			.	.																.	.
Query Sequence		D	P	.	.	.	.	.	.	Q	A	L	K	A	L	A	G	Q	F	D	L	I	I	N	T	V	N	V	S	L	D	W	Q	P	Y	F	E	A	L	T	Y	G	G	N	F	H	T	V	G	A	V	L	T	P	L	S	V	P	A	.	.	F	T	L	I	A	G	D	R	S	V	S	G	S	A	T	.	.	G	T	P
Query Conservation				.	.	.	.	.	.																																																			.	.																.	.
Alig confidence				.	.	.	.	.	.																																																			.	.																.	.
Template Conservation
Template Sequence		D	Y	D	K	P	I	Y	E	V	I	C	E	K	T	N	G	G	V	D	Y	A	V	E	C	A	G	R	I	E	T	M	M	N	A	L	Q	S	T	Y	C	G	S	G	V	T	V	V	L	G	L	A	S	P	N	E	R	L	P	L	D	P	L	L	L	L	T	G	R	S	L	K	G	S	V	F	G	G	F	K	G
Template Known Secondary structure		G		S	S										T	T	S		B	S						S												T	B		T	T	T											T	T							T					T	T							S	G	G	G			G
Template Predicted Secondary structure
Template SS confidence
		1244	.	.	.	.	.	1250	.	.	.	.	.	.	.	.	.	1260	.	.	.	.	.	.	.	.	.	1270	.	.	.	.	.	.	.	.	.	1280	.	.	.	.	.	.	.	.	.	1290	.	.	.	.	.	.	.	.	.	1300	.	.	.	.	.	.	.	.	.	1310	.	.	.	.	.	.	.	.	.	1320	.	.	.
		291	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.				.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.
Predicted Secondary structure																			.	.	.
Query SS confidence																			.	.	.
Query Sequence		Y	E	L	R	K	L	M	R	F	A	A	R	S	K	V	A	P	.	.	.	T	T	E	L	F	P	M	S	K	I	N	D	A	I	Q	H	V	R	D	G	K	A	R	Y	R	V	V	L
Query Conservation																			.	.	.
Alig confidence																			.	.	.
Template Conservation
Template Sequence		E	E	V	S	R	L	V	D	D	Y	M	K	K	K	I	N	V	N	F	L	V	S	T	K	L	T	L	D	Q	I	N	K	A	F	E	L	L	S	S	G	Q	G	V	R	S	I	M	I
Template Known Secondary structure		G	G										T	T	S	S		G	G	G	G							G	G	G								T	T	T	S	S		S
Template Predicted Secondary structure
Template SS confidence
		1324	.	.	.	.	.	1330	.	.	.	.	.	.	.	.	.	1340	.	.	.	.	.	.	.	.	.	1350	.	.	.	.	.	.	.	.	.	1360	.	.	.	.	.	.	.	.	.	1370	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions