Return to main results Retrieve Phyre Job Id

Job DescriptionP27250
Confidence100.00%DateThu Jan 5 11:43:30 GMT 2012
Rank11Aligned Residues334
% Identity30%Templatec1lluD_
PDB info PDB header:oxidoreductaseChain: D: PDB Molecule:alcohol dehydrogenase; PDBTitle: the ternary complex of pseudomonas aeruginosa alcohol2 dehydrogenase with its coenzyme and weak substrate
Resolution2.30 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   2.......10.........20.........30.........40.........50..... ....60.........70.........80
Predicted Secondary structure 






















.
















Query SS confidence 





















































.
























Query Sequence  SMIKSYAAKEAGGELEVYEYDPGELRPQDVEVQVDYCGICHSDLSMIDNEWGFS. QYPLVAGHEVIGRVVALGSAAQDKG
Query Conservation    


 
    
  
   
   
     





 
  

  
     
     .  
 
 
 
  
 
   
  
    
Alig confidence 





















































.




















..

Template Conservation   



 
    
  
 
     
     





 
  

  
     
        
 
 
 
  
 
  

  
..  
Template Sequence  QTMKAAVVHAYGAPLRIEEVKVPLPGPGQVLVKIEASGVCHTDLHAAEGDWPVKPPLPFIPGHEGVGYVAAVGSGV. . TR
Template Known Secondary structure  S
BB
BTTB








TT


TT
SSS


SSB


S

TT
..
S
Template Predicted Secondary structure 


































..

Template SS confidence 















































































   5....10.........20.........30.........40.........50.........60.........70.........80 ..
 
   81........90.........100.........110.........120.........130.........140.........150.........160
Predicted Secondary structure 

























































Query SS confidence 















































































Query Sequence  LQVGQRVGIGWTARSCGHCDACISGNQINCEQGAVPTIMNRGGFAEKLRADWQWVIPLPENIDIESAGPLLCGGITVFKP
Query Conservation    




                                  
  
                                   
Alig confidence 















































































Template Conservation    




                                                                         
Template Sequence  VKEGDRVGIPWLYTACGCCEHCLTGWETLCESQQNTGYSVNGGYAEYVLADPNYVGILPKNVEFAEIAPILCAGVTVYKG
Template Known Secondary structure 

TT

S

SSSTTTTTT
GGG
TT
BTTTB

SSBS
TTTS

TTS
GGGGT
Template Predicted Secondary structure 
































































Template SS confidence 















































































   83......90.........100.........110.........120.........130.........140.........150.........160..
 
   161........170.........180.........190.........200.........210.........220........ .230.......
Predicted Secondary structure 





























...



Query SS confidence 



































































. . .








Query Sequence  LLMHHITATSRVGVIGIGGLGHIAIKLLHAMGCEVTAFSSNPAKEQEVLAMGADKVVNSRDPQALKAL. . . AGQFDLIIN
Query Conservation             
           
          
                
 
 


          ...         
Alig confidence 



































































...








Template Conservation                                    
                                             
Template Sequence  LKQTNARPGQWVAISGIGGLGHVAVQYARAMGLHVAAIDIDDAKLELARKLGASLTVNARQEDPVEAIQRDIGGAHGVLV
Template Known Secondary structure  T

TTS

STTTT
S
TT
STTTS
TSS
Template Predicted Secondary structure 









































Template SS confidence 















































































   163......170.........180.........190.........200.........210.........220.........230.........240..
 
   238.240.........250.........260.........270.........280.........290.........300.........310.......
Predicted Secondary structure 




























Query SS confidence 















































































Query Sequence  TVNVSLDWQPYFEALTYGGNFHTVGAVLTPLSVPAFTLIAGDRSVSGSATGTPYELRKLMRFAARSKVAPTTELFPMSKI
Query Conservation                                              
 
              

  
 
        
   
Alig confidence 















































































Template Conservation                                              
 
              

  
 
        

  
Template Sequence  TAVSNSAFGQAIGMARRGGTIALVGLPPGDFPTPIFDVVLKGLHIAGSIVGTRADLQEALDFAGEGLVKATIHPGKLDDI
Template Known Secondary structure 



S




S




TT


S

TTS




GGG
Template Predicted Secondary structure 

































Template SS confidence 















































































   243......250.........260.........270.........280.........290.........300.........310.........320..
 
   318.320.........330.......
Predicted Secondary structure 





Query SS confidence 



















Query Sequence  NDAIQHVRDGKARYRVVLKA
Query Conservation    
   
  
   




  
Alig confidence 



















Template Conservation    
   
  
   




 
Template Sequence  NQILDQMRAGQIEGRIVLEM
Template Known Secondary structure  TT

SS
Template Predicted Secondary structure 






Template SS confidence 



















   323......330.........340..
 
Download:Text version FASTA pairwise alignment 3D Model in PDB format

View in Jmol

Send structure to FirstGlance for more viewing options


Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions