Job Description P27250 Confidence 100.00% Date Thu Jan 5 11:43:30 GMT 2012 Rank 17 Aligned Residues 332 % Identity 22% Template c1hf3A_ PDB info PDB header:oxidoreductase Chain: A: PDB Molecule:alcohol dehydrogenase e chain; PDBTitle: atomic x-ray structure of liver alcohol dehydrogenase2 containing cadmium and a hydroxide adduct to nadh Resolution 1.95 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80
Predicted Secondary structure
Query SS confidence
Query Sequence		M	S	M	I	K	S	Y	A	A	K	E	A	G	G	E	L	E	V	Y	E	Y	D	P	G	E	L	R	P	Q	D	V	E	V	Q	V	D	Y	C	G	I	C	H	S	D	L	S	M	I	D	N	E	W	G	F	S	Q	Y	P	L	V	A	G	H	E	V	I	G	R	V	V	A	L	G	S	A	A	Q	D	K	G
Query Conservation
Alig confidence																																																									.																					.	.
Template Conservation																																																									.																					.	.
Template Sequence		V	I	K	C	K	A	A	V	L	W	E	E	K	K	P	F	S	I	E	E	V	E	V	A	P	P	K	A	H	E	V	R	I	K	M	V	A	T	G	I	C	R	S	D	D	H	V	V	S	G	T	L	V	T	P	.	L	P	V	I	A	G	H	E	A	A	G	I	V	E	S	I	G	E	G	V	.	.	T	T
Template Known Secondary structure										B		S	T	T	S														T	T																					T	S	S				.	S	S	B					S										T	T		.	.		S
Template Predicted Secondary structure																																																									.																					.	.
Template SS confidence
		6	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60		.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80			.	.
		81	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.																						.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		L	Q	V	G	Q	R	V	G	I	G	W	T	A	R	S	C	G	H	C	D	A	C	I	S	G	N	Q	I	N	C	E	Q	G	A	V	P	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T	I	M	N	R	G	G	F	A	E	K	L	R	A	D	W	Q	W	V	I	P	L	P
Query Conservation																																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence									.																													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation									.
Template Sequence		V	R	P	G	D	K	V	.	I	P	L	F	T	P	Q	C	G	K	C	R	V	C	K	H	P	E	G	N	F	C	L	K	N	D	L	S	M	P	R	G	T	M	Q	D	G	T	S	R	F	T	C	R	G	K	P	I	H	H	F	L	G	T	S	T	F	S	Q	Y	T	V	V	D	E	I	S	V	A	K	I	D
Template Known Secondary structure				T	T				.				S	S				S		S					S	S	S					T	T		S	S	S	S				S		T	T	S			S				T	T				B		S	T	T	T			S	B	S						G	G	G
Template Predicted Secondary structure									.
Template SS confidence
		83	.	.	.	.	.	.		90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.
		140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160		.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.		.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.
Predicted Secondary structure																							.																																		.
Query SS confidence																							.																																		.
Query Sequence		E	N	I	D	I	E	S	A	G	P	L	L	C	G	G	I	T	V	F	K	P	.	L	L	M	H	H	I	T	A	T	S	R	V	G	V	I	G	I	G	G	L	G	H	I	A	I	K	L	L	H	A	M	G	C	.	E	V	T	A	F	S	S	N	P	A	K	E	Q	E	V	L	A	M	G	A	D	K	V	V
Query Conservation																							.																																		.
Alig confidence																							.																																		.
Template Conservation
Template Sequence		A	A	S	P	L	E	K	V	C	L	I	G	C	G	F	S	T	G	Y	G	S	A	V	K	V	A	K	V	T	Q	G	S	T	C	A	V	F	G	L	G	G	V	G	L	S	V	I	M	G	C	K	A	A	G	A	A	R	I	I	G	V	D	I	N	K	D	K	F	A	K	A	K	E	V	G	A	T	E	C	V
Template Known Secondary structure		T	T							G	G	G	G	T											T	T	T				T	T									S													T	T		S							S		G	G	G								T		S
Template Predicted Secondary structure
Template SS confidence
		162	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.
		218	.	220	.	.							.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.			.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.
Predicted Secondary structure							.	.	.	.	.	.																																												.	.
Query SS confidence							.	.	.	.	.	.																																												.	.
Query Sequence		N	S	R	D	P	.	.	.	.	.	.	Q	A	L	K	A	L	A	G	Q	F	D	L	I	I	N	T	V	N	V	S	L	D	W	Q	P	Y	F	E	A	L	T	Y	G	G	N	F	H	T	V	G	A	V	L	.	.	T	P	L	S	V	P	A	F	T	L	I	A	G	D	R	S	V	S	G	S	A	T	G	T
Query Conservation							.	.	.	.	.	.																																												.	.
Alig confidence							.	.	.	.	.	.																																												.	.
Template Conservation
Template Sequence		N	P	Q	D	Y	K	K	P	I	Q	E	V	L	T	E	M	S	N	G	G	V	D	F	S	F	E	V	I	G	R	L	D	T	M	V	T	A	L	S	C	C	Q	E	A	Y	G	V	S	V	I	V	G	V	P	P	D	S	Q	N	L	S	M	N	P	M	L	L	L	S	G	R	T	W	K	G	A	I	F	G	G
Template Known Secondary structure			G	G	G		S	S											T	S		B	S						S													B		T	T	T							S				T	T							T					T	T							S	G	G	G
Template Predicted Secondary structure
Template SS confidence
		242	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.
					290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.				.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.
Predicted Secondary structure		.	.	.																			.	.	.
Query SS confidence		.	.	.																			.	.	.
Query Sequence		.	.	.	P	Y	E	L	R	K	L	M	R	F	A	A	R	S	K	V	A	P	.	.	.	T	T	E	L	F	P	M	S	K	I	N	D	A	I	Q	H	V	R	D	G	K	A	R	Y	R	V	V	L	K	A
Query Conservation		.	.	.																			.	.	.
Alig confidence		.	.	.																			.	.	.																							.
Template Conservation																																																.
Template Sequence		F	K	S	K	D	S	V	P	K	L	V	A	D	F	M	A	K	K	F	A	L	D	P	L	I	T	H	V	L	P	F	E	K	I	N	E	G	F	D	L	L	R	S	G	E	S	.	I	R	T	I	L	T	F
Template Known Secondary structure																	T	T	S	S			G	G	G							G	G	G										T	T			.	S
Template Predicted Secondary structure																																																.
Template SS confidence
		322	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.		.	.	370	.	.	.	.

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions