 |
Job Description | P17410 | Confidence | 95.66% | Date | Thu Jan 5 11:36:07 GMT 2012 |
Rank | 103 | Aligned Residues | 58 |
% Identity | 16% | Template | c3ehkC_ |
PDB info |
PDB header:plant protein | Chain: C: PDB Molecule:prunin; |
PDBTitle: crystal structure of pru du amandin, an allergenic protein2 from prunus dulcis
|
Resolution | 3.20 Å |
|
 |
  |   |
40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | |
|
|
|
60 | . | . | . | . | |
|
|
|
|
|
|
|
|
|
|
|
. | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . | . | . |
|
|  |  |  | . | . | . | . | . | . | . | . | . | . | . | . |  |  |
|
|
|
|  |  |  |  |
|
|
|
|  |  |
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |
|
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
|
|
|
|
| . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
H | Q | H | D | Y | Y | E | F | T | L | V | L | T | G | R | Y | F | Q | E | I | . |
. |
. |
. |
N | G | K | R | V | . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
L | L | E | R | G | D | F | V | F | I | P | L | G | S | H | H | Q | S | F | Y | E | F | G | A | T | R | I | L | N | V | G | I | S |
Query Conservation |   |
|   |
|   |   |   |
|
|   |   |
|   |   |
|   |   |   |   |   |   | . | . | . | . |   |   |   |   |   | . | . | . | . | . | . | . | . | . | . | . | . |   |
|   |   |
|   |   |   |   |
|   |   |   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . |
|
|
|
|
| . | . | . | . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |   |   |
|   |   |
|   |
|
|   |   |
|   |
|   |   |
|   |
|   |
|
|   |   |
|
|
|   |   |   |   |   |
|   |   |   |
|   |   |   |
|   |   |
|
|
|   |   |
|
|
|
|   |   |   |   |   |   |
|   |
|   |   |   |   |   |   |
|   |   |   |
|
Template Sequence |   |
S | Y | S | N | A | P | Q | L | I | Y | I | V | Q | G | R | G | V | L | G | A | V | F | S | G | C | P | E | T | F | E | E | S | Q | L | D | R | H | Q | K | T | R | R | I | R | E | G | D | V | V | A | I | P | A | G | V | A | Y | W | S | Y | N | D | G | D | Q | E | L | V | A | V | N | L | F | H |
Template Known Secondary structure |   |
 |  |
| S | S |
|  |  |  |  |  |  |  |
|  |  |  |  |  |  |  |
| T | T |
|
|
|
|  |  |
|
|
|
|
|  |  | S |
|  |  |  |  |  | T | T |  |  |  |  |  |
| T | T |
|  |  |  |  |  |
|
| S | S | S |
|  |  |  |  |  |  |  |  |
Template Predicted Secondary structure |   |
|
|
|
|
|
|  |  |  |  |  |  |  |
|  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |
|
|
|
|
|
|
|  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |
|
|
|
|  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
64 | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|