Job Description P17410 Confidence 66.71% Date Thu Jan 5 11:36:07 GMT 2012 Rank 369 Aligned Residues 48 % Identity 4% Template c1umqA_ PDB info PDB header:dna-binding protein Chain: A: PDB Molecule:photosynthetic apparatus regulatory protein; PDBTitle: solution structure and dna binding of the effector domain2 from the global regulator prra(rega) from r. sphaeroides:3 insights into dna binding specificity Resolution UNK

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		162	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	E	E	Q	V	I	D	D	V	P	Q	W	L	K	S	T	V	E	K	M	H	D	K	E	Q	F	S	E	S	A	L	E	N	M	V	A	L	S	A	K	S	Q	E	Y	L	T	R	A	T	Q	R
Query Conservation
Alig confidence																									.	.	.
Template Conservation																									.	.	.
Template Sequence		P	P	P	E	N	P	M	S	A	D	R	V	R	W	E	H	I	Q	R	I	Y	E	M	.	.	.	C	D	R	N	V	S	E	T	A	R	R	L	N	M	H	R	R	T	L	Q	R	I	L	A	K
Template Known Secondary structure				S		S	S	S																	.	.	.	T	T	S										T	S											T
Template Predicted Secondary structure																									.	.	.
Template SS confidence
		30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.				.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions