Return to main results Retrieve Phyre Job Id

Job DescriptionP21503
Confidence2.35%DateThu Jan 5 11:38:22 GMT 2012
Rank23Aligned Residues45
% Identity9%Templated1k8ib2
SCOP infoMHC antigen-recognition domain MHC antigen-recognition domain MHC antigen-recognition domain
Resolution3.10

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   23......30.........40.........50.........60.......
Predicted Secondary structure 


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Query Sequence  AVLNTLVPLWLAQEHMSTWQVGVVSSSYFTGNLVGTLLTGYVIKR
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Template Conservation 


  

  

 


   
  

  
  
 


 

 

  

 
Template Sequence  GVLSRLAEIISNILNEQESLIHRLQNGLQDCATHTQPFWDVLTHR
Template Known Secondary structure  STTT
TT
Template Predicted Secondary structure 


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   48.50.........60.........70.........80.........90..
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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