Job Description P39346 Confidence 100.00% Date Thu Jan 5 11:59:35 GMT 2012 Rank 51 Aligned Residues 333 % Identity 13% Template c3iupB_ PDB info PDB header:oxidoreductase Chain: B: PDB Molecule:putative nadph:quinone oxidoreductase; PDBTitle: crystal structure of putative nadph:quinone oxidoreductase2 (yp_296108.1) from ralstonia eutropha jmp134 at 1.70 a resolution Resolution 1.70 Å

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		2	.	.	.	.	.	.	.	10		.	.	.	.	.	.	.	.	.	20	.	.	.	.		.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.			.	.	.	.	.	.
Predicted Secondary structure											.															.																																																.	.
Query SS confidence											.															.																																																.	.
Query Sequence		Q	V	K	T	Q	S	C	V	V	.	A	G	K	K	T	V	A	V	T	E	Q	T	I	D	.	W	N	N	N	G	T	L	V	Q	I	T	R	G	G	I	C	G	S	D	L	H	Y	Y	Q	E	G	K	V	G	N	F	M	I	K	A	P	M	V	L	G	H	E	V	I	G	K	V	.	.	I	H	S	D	S	S
Query Conservation											.															.																																																.	.
Alig confidence											.															.																													.	.	.																	.	.
Template Conservation																																																							.	.	.
Template Sequence		A	L	Q	L	R	S	R	I	K	S	S	G	E	L	E	L	S	L	D	S	I	D	T	P	H	P	G	P	D	E	V	L	I	R	I	E	A	S	P	L	N	P	S	D	L	G	L	L	F	G	A	A	D	.	.	.	X	S	T	A	K	A	S	G	T	A	E	R	P	I	V	T	A	R	V	P	E	G	A	X
Template Known Secondary structure											T	T	S																T	T																					T	T			.	.	.										S	S	S									G	G	G	G
Template Predicted Secondary structure																																																							.	.	.
Template SS confidence
		4	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.				.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80
		78	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	L	H	E	G	Q	T	V	A	I	N	P	S	K	P	C	G	H	C	K	Y	C	I	E	H	N	E	N	Q	C	T	D	M	R	F	F	G	S	A	M	Y	F	P	H	V	D	G	G	F	T	R	Y	K	M	V	E	T	S	Q	C	V	P	Y	P	A	K	A	D	E	K	V	M	A	F	A	E	P	L	A	V
Query Conservation
Alig confidence																																								.	.	.
Template Conservation																																								.	.	.
Template Sequence		R	S	X	A	G	R	L	D	A	S	X	P	V	G	N	E	G	A	G	V	V	V	E	A	G	S	S	P	A	A	Q	A	L	X	G	K	T	V	.	.	.	A	A	I	G	G	A	X	Y	S	Q	Y	R	C	I	P	A	D	Q	C	L	V	L	P	E	G	A	T	P	A	D	G	A	S	S	F	V	N	P	L
Template Known Secondary structure		G	G	G	G	G	G	T	T							S											S	S					T	T	T	T				.	.	.					S			S	B	S						G	G	G						T	T							T	T	S	S
Template Predicted Secondary structure																																								.	.	.
Template SS confidence
		81	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.				.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.
		158	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.		.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.
Predicted Secondary structure																					.																																																										.	.	.
Query SS confidence																					.																																																										.	.	.
Query Sequence		A	I	H	A	A	H	Q	A	G	E	L	Q	G	K	R	V	F	I	S	.	G	V	G	P	I	G	C	L	I	V	S	A	V	K	T	L	G	A	A	E	I	V	C	A	D	V	S	P	R	S	L	S	L	G	K	E	M	G	A	D	V	L	V	N	P	Q	N	D	D	M	D	H	W	K	A	E	K	.	.	.
Query Conservation																					.																																																										.	.	.
Alig confidence																					.																																																										.	.	.
Template Conservation
Template Sequence		T	A	L	G	X	V	E	T	X	R	L	E	G	H	S	A	L	V	H	T	A	A	A	S	N	L	G	Q	X	L	N	Q	I	C	L	K	D	G	I	K	L	V	N	I	V	R	K	Q	E	Q	A	D	L	L	K	A	Q	G	A	V	H	V	C	N	A	A	S	P	T	F	X	Q	D	L	T	E	A	L	V	S
Template Known Secondary structure													T	T		S					S	S	T	T	S														T								S	S										T	T		S					T	T	S	T	T
Template Predicted Secondary structure
Template SS confidence
		158	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.
		234	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.																.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.
Predicted Secondary structure																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																				.	.	.	.	.	.
Query SS confidence																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																				.	.	.	.	.	.
Query Sequence		G	Y	F	D	V	S	F	E	V	S	G	H	P	S	S	V	N	T	C	L	E	V	T	R	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	A	R	G	V	M	V	Q	V	G	M	G	G	A	M	A	E	F	P	M	M	T	L	I	G	K	E	I	S	L	R	G	S	F	R	F	.	.	.	.	.	.
Query Conservation																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																				.	.	.	.	.	.
Alig confidence																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																				.	.	.	.	.	.
Template Conservation
Template Sequence		T	G	A	T	I	A	F	D	A	T	G	G	G	K	L	G	G	Q	I	L	T	C	X	E	A	A	L	N	K	S	A	R	E	Y	S	R	Y	G	S	T	T	H	K	Q	V	Y	L	Y	G	G	L	D	T	S	P	T	E	F	N	R	N	F	G	X	A	W	G	X	G	G	W	L	L	F	P	F	L	Q	K	I
Template Known Secondary structure										S					S																T			S			T	T			S	S										S											S		S
Template Predicted Secondary structure
Template SS confidence
		238	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.
						293	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.			.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.
Predicted Secondary structure		.	.	.	.																																			.	.
Query SS confidence		.	.	.	.																																			.	.
Query Sequence		.	.	.	.	T	S	E	F	N	T	A	V	S	W	L	A	N	G	V	I	N	P	L	P	L	L	S	A	E	Y	P	F	T	D	L	E	E	A	.	.	L	R	F	A	G	D	K	T	Q	A	A	K	V	Q	L	V
Query Conservation		.	.	.	.																																			.	.
Alig confidence		.	.	.	.																				.	.														.	.
Template Conservation																									.	.
Template Sequence		G	R	E	R	A	N	A	L	K	Q	R	V	V	A	E	L	K	T	T	F	A	S	H	.	.	Y	S	K	E	I	S	L	A	E	V	L	D	L	D	X	I	A	V	Y	N	K	R	A	T	G	E	K	Y	L	I	N
Template Known Secondary structure																T	T	T	T	T	T				.	.		S									T									T	T			T	T
Template Predicted Secondary structure																									.	.
Template SS confidence
		318	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340			.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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