Return to main results Retrieve Phyre Job Id

Job DescriptionP39346
Confidence100.00%DateThu Jan 5 11:59:35 GMT 2012
Rank23Aligned Residues332
% Identity20%Templatec2cf5A_
PDB info PDB header:oxidoreductaseChain: A: PDB Molecule:cinnamyl alcohol dehydrogenase; PDBTitle: crystal structures of the arabidopsis cinnamyl alcohol2 dehydrogenases, atcad5
Resolution2.0 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   4.....10..... ....20.... .....30.........40.........50.........60.........70. ........
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Query Sequence  KTQSCVVAGKKT. VAVTEQTID. WNNNGTLVQITRGGICGSDLHYYQEGKVGNFMIKAPMVLGHEVIGKV. . IHSDSSEL
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Template Sequence  KTTGWAARDPSGILSPYTYTLRETGPEDVNIRIICCGICHTDLHQTKNDLG. . . MSNYPMVPGHEVVGEVVEVGSDVSKF
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STT






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   910.........20.........30.........40.........50......... 60.........70.........80.....
 
   80.........90. ........100.........110.........120... ......130.........140.........150......
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Query Sequence  HEGQTVAINPSK. PCGHCKYCIEHNENQCTDMRFFGSAMYFPHVD. . GGFTRYKMVETSQCVPYPAKADEKVMAFAEPLA
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Template Sequence  TVGDIVGVGCLVGCCGGCSPCERDLEQYCPKKIWSYNDVYINGQPTQGGFAKATVVHQKFVVKIPEGMAVEQAAPLLCAG
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TT

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SSSTT
GGG
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   86...90.........100.........110.........120.........130.........140.........150.........160.....
 
   157..160.... .....170.........180.........190.........200.........210.........220.........230....
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Query Sequence  VAIHAAHQ. . AGELQGKRVFISGVGPIGCLIVSAVKTLGAAEIVCADVSPRSLSLGKEMGADVLVNPQNDDMDHWKAEKG
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Template Sequence  VTVYSPLSHFGLKQPGLRGGILGLGGVGHMGVKIAKAMGHHVTVISSSNKKREEALQDLGADDYVIGSDQAKMSELADS.
Template Known Secondary structure  TSTTSTT


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   166...170.........180.........190.........200.........210.........220.........230.........240....
 
   235....240.........250.........260.........270.........280.........290.. .......300.........310...
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Query Sequence  YFDVSFEVSGHPSSVNTCLEVTRARGVMVQVGMGGAMAEFPMMTLIGKEISLRGSFRF. TSEFNTAVSWLANGVINPLPL
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Template Sequence  . LDYVIDTVPVHHALEPYLSLLKLDGKLILMGVINNPLQFLTPLLMLGRKVITGSFIGSMKETEEMLEFCKEKGLSS. . .
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   245....250.........260.........270.........280.........290.........300.........310.........320
 
   314.....320.........330.........340...
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Query Sequence  LSAEYPFTDLEEALRFAGDKTQAAKVQLVF
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Template Sequence  IIEVVKMDYVNTAFERLEKNDVRYRFVVDV
Template Known Secondary structure 
GGGTT
SSST
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   321........330.........340.........350
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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