Job Description P39346 Confidence 100.00% Date Thu Jan 5 11:59:35 GMT 2012 Rank 33 Aligned Residues 331 % Identity 15% Template c2cdaA_ PDB info PDB header:oxidoreductase Chain: A: PDB Molecule:glucose dehydrogenase; PDBTitle: sulfolobus solfataricus glucose dehydrogenase 1 in complex2 with nadp Resolution 2.28 Å

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		5	.	.	.	.	10	.	.	.	.	.		.	.	.	.	20	.	.	.	.			.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.
Predicted Secondary structure													.										.	.
Query SS confidence													.										.	.
Query Sequence		T	Q	S	C	V	V	A	G	K	K	T	.	V	A	V	T	E	Q	T	I	D	.	.	W	N	N	N	G	T	L	V	Q	I	T	R	G	G	I	C	G	S	D	L	H	Y	Y	Q	E	G	K	V	G	N	F	M	I	K	A	P	M	V	L	G	H	E	V	I	G	K	V	I	H	S	D	S	S	E	L	H	E
Query Conservation													.										.	.
Alig confidence													.										.	.																												.	.	.	.																					.
Template Conservation																																																				.	.	.	.																					.
Template Sequence		M	K	A	I	I	V	K	P	P	N	A	G	V	Q	V	K	D	V	D	E	K	K	L	D	S	Y	G	K	I	K	I	R	T	I	Y	N	G	I	C	G	T	D	R	E	I	V	N	G	K	L	.	.	.	.	K	G	K	D	F	L	V	L	G	H	E	A	I	G	V	V	E	E	S	Y	.	H	G	F	S	Q
Template Known Secondary structure									T	T	S										G	G	G	S				S	S																			T	T			.	.	.	.				S						S							S	S			.	S	S			T
Template Predicted Secondary structure																																																				.	.	.	.																					.
Template SS confidence
		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50					.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70		.	.	.	.	.
		82	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	Q	T	V	A	I	N	P	S	K	P	C	G	H	C	K	Y	C	I	E	H	N	E	N	Q	C	T	D	M	R	F	F	G	S	A	M	Y	F	P	H	V	D	G	G	F	T	R	Y	K	M	V	E	T	S	Q	C	V	P	Y	P	A	K	A	D	E	K	V	M	A	F	A	E	P	L	A	V	A	I	H	A
Query Conservation
Alig confidence																																				.	.
Template Conservation																																				.	.
Template Sequence		G	D	L	V	M	P	V	N	R	R	G	C	G	I	C	R	N	C	L	V	G	R	P	D	F	C	E	T	G	E	F	G	E	A	.	.	G	I	H	K	M	D	G	F	M	R	E	W	W	Y	D	D	P	K	Y	L	V	K	I	P	K	S	I	E	D	I	G	I	L	A	Q	P	L	A	D	I	E	K	S	I
Template Known Secondary structure		T							S					S	S	S					T	T		G	G	G		S	S	S						.	.	T	T	B					S		B	S						G	G	G						G	G	G	T	T	T	G	G	G
Template Predicted Secondary structure																																				.	.
Template SS confidence
		82	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.			.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.
		162	.	.													.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.			.	.
Predicted Secondary structure					.	.	.	.	.	.	.	.	.	.	.	.																																																														.	.
Query SS confidence					.	.	.	.	.	.	.	.	.	.	.	.																																																														.	.
Query Sequence		A	H	Q	.	.	.	.	.	.	.	.	.	.	.	.	A	G	E	L	Q	G	K	R	V	F	I	S	G	V	G	P	I	G	C	L	I	V	S	A	V	K	T	L	G	A	A	E	I	V	C	A	D	V	S	P	R	S	L	S	L	G	K	E	M	G	A	D	V	L	V	N	P	Q	N	D	D	.	.	M	D
Query Conservation					.	.	.	.	.	.	.	.	.	.	.	.																																																														.	.
Alig confidence					.	.	.	.	.	.	.	.	.	.	.	.																																																														.	.
Template Conservation
Template Sequence		E	E	I	L	E	V	Q	K	R	V	P	V	W	T	C	D	D	G	T	L	N	C	R	K	V	L	V	V	G	T	G	P	I	G	V	L	F	T	L	L	F	R	T	Y	G	L	E	V	W	M	A	N	R	R	E	P	T	E	V	E	Q	T	V	I	E	E	T	K	T	N	Y	Y	N	S	S	N	G	Y	D	K
Template Known Secondary structure								G	G	G	S	S			S		T	T	S	S	S	T	T																						T	T								S	S														T							T	T		S
Template Predicted Secondary structure
Template SS confidence
		160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.
		228	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.					.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.		.	.	.	.	.	.	.	300	.	.
Predicted Secondary structure																																														.	.	.	.																						.
Query SS confidence																																														.	.	.	.																						.
Query Sequence		H	W	K	A	E	K	G	Y	F	D	V	S	F	E	V	S	G	H	P	S	S	V	N	T	C	L	E	V	T	R	A	R	G	V	M	V	Q	V	G	M	G	G	A	M	.	.	.	.	A	E	F	P	M	M	T	L	I	G	K	E	I	S	L	R	G	S	F	R	F	.	T	S	E	F	N	T	A	V	S	W
Query Conservation																																														.	.	.	.																						.
Alig confidence																																														.	.	.	.																						.
Template Conservation
Template Sequence		L	K	D	S	V	G	K	F	D	V	I	I	D	A	T	G	A	D	V	N	I	L	G	N	V	I	P	L	L	G	R	N	G	V	L	G	L	F	G	F	S	T	S	G	S	V	P	L	D	Y	K	T	L	Q	E	I	V	H	T	N	K	T	I	I	G	L	V	N	G	Q	K	P	H	F	Q	Q	A	V	V	H
Template Known Secondary structure						T													B	T							G	G	G											S				B																T	T
Template Predicted Secondary structure
Template SS confidence
		240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.
		303	.	.	.	.	.					.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.
Predicted Secondary structure								.	.	.	.
Query SS confidence								.	.	.	.
Query Sequence		L	A	N	G	V	I	.	.	.	.	N	P	L	P	L	L	S	A	E	Y	P	F	T	D	L	E	E	A	L	R	F	A	G	D	K	T	Q	A	A	K	V	Q	L	V	F
Query Conservation								.	.	.	.
Alig confidence								.	.	.	.																												.
Template Conservation																																							.
Template Sequence		L	A	S	W	K	T	L	Y	P	K	A	A	K	M	L	I	T	K	T	V	S	I	N	D	E	K	E	L	L	K	V	L	R	E	K	E	H	.	G	E	I	K	I	R	I
Template Known Secondary structure									S					T	T	S							T	T														T	.	T
Template Predicted Secondary structure																																							.
Template SS confidence
		320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.		.	.	.	360	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions