Job Description P39346 Confidence 100.00% Date Thu Jan 5 11:59:35 GMT 2012 Rank 42 Aligned Residues 307 % Identity 18% Template c2c0cB_ PDB info PDB header:oxidoreductase Chain: B: PDB Molecule:zinc binding alcohol dehydrogenase, domain PDBTitle: structure of the mgc45594 gene product Resolution 1.45 Å

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		2	.	.	.	.	.	.	.	10	.	.	.	.	.						.	.	.	.		20	.	.	.	.		.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.			.
Predicted Secondary structure																.	.	.	.	.					.						.																																																.	.
Query SS confidence																.	.	.	.	.					.						.																																																.	.
Query Sequence		Q	V	K	T	Q	S	C	V	V	A	G	K	K	T	.	.	.	.	.	V	A	V	T	.	E	Q	T	I	D	.	W	N	N	N	G	T	L	V	Q	I	T	R	G	G	I	C	G	S	D	L	H	Y	Y	Q	E	G	K	V	G	N	F	M	I	K	A	P	M	V	L	G	H	E	V	I	G	K	V	.	.	I
Query Conservation																.	.	.	.	.					.						.																																																.	.
Alig confidence																.	.	.	.	.					.						.																														.	.																	.	.
Template Conservation																																																													.	.
Template Sequence		Q	S	M	M	Q	K	L	V	V	T	R	L	S	P	N	F	R	E	A	V	T	L	S	R	D	C	P	V	P	L	P	G	D	G	D	L	L	V	R	N	R	F	V	G	V	N	A	S	D	I	N	Y	S	A	G	R	Y	D	P	.	.	S	V	K	P	P	F	D	I	G	F	E	G	I	G	E	V	V	A	L
Template Known Secondary structure												S			S	S																		T	T													T	T						T	T	T	T		T	.	.	T			S						S
Template Predicted Secondary structure																																																													.	.
Template SS confidence
		21	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.			80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.
		73	.	.	.	.	.		.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.
Predicted Secondary structure								.
Query SS confidence								.
Query Sequence		H	S	D	S	S	E	.	L	H	E	G	Q	T	V	A	I	N	P	S	K	P	C	G	H	C	K	Y	C	I	E	H	N	E	N	Q	C	T	D	M	R	F	F	G	S	A	M	Y	F	P	H	V	D	G	G	F	T	R	Y	K	M	V	E	T	S	Q	C	V	P	Y	P	A	K	A	D	E	K	V	M	A	F
Query Conservation								.
Alig confidence								.																																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		G	L	S	A	S	A	R	Y	T	V	G	Q	A	V	A	Y	M	A	P	G	S	F	A	E	Y	T	V	V	P	A	S	I	A	T	P	V	P	S	V	K	P	E	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	Y	L	T	L	L
Template Known Secondary structure			T	T	S		T	T			T	T								S			S	B	S						G	G	G					S	S					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		99	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140																																		.	.	.	.	.
		152	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.		.	.	.	.	230
Predicted Secondary structure																																																																												.
Query SS confidence																																																																												.
Query Sequence		A	E	P	L	A	V	A	I	H	A	A	H	Q	A	G	E	L	Q	G	K	R	V	F	I	S	G	V	G	P	I	G	C	L	I	V	S	A	V	K	T	L	G	A	A	E	I	V	C	A	D	V	S	P	R	S	L	S	L	G	K	E	M	G	A	D	V	L	V	N	P	Q	N	D	D	.	M	D	H	W	K
Query Conservation																																																																												.
Alig confidence																																																																												.
Template Conservation
Template Sequence		V	S	G	T	T	A	Y	I	S	L	K	E	L	G	G	L	S	E	G	K	K	V	L	V	T	A	A	A	G	G	T	G	Q	F	A	M	Q	L	S	K	K	A	K	C	H	V	I	G	T	C	S	S	D	E	K	S	A	F	L	K	S	L	G	C	D	R	P	I	N	Y	K	T	E	P	V	G	T	V	L	K
Template Known Secondary structure		T													T				T	T						T	T	T	T	B	T	T											T	T								S	S										T	T		S					T	T	T	S
Template Predicted Secondary structure
Template SS confidence
		146	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.
		231	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.											.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.							.	.
Predicted Secondary structure																																						.	.	.	.	.	.	.	.	.	.																											.	.	.	.	.	.
Query SS confidence																																						.	.	.	.	.	.	.	.	.	.																											.	.	.	.	.	.
Query Sequence		A	E	K	G	Y	F	D	V	S	F	E	V	S	G	H	P	S	S	V	N	T	C	L	E	V	T	R	A	R	G	V	M	V	Q	V	G	.	.	.	.	.	.	.	.	.	.	M	G	G	A	M	A	E	F	P	M	M	T	L	I	G	K	E	I	S	L	R	G	S	F	R	F	.	.	.	.	.	.	T	S
Query Conservation																																						.	.	.	.	.	.	.	.	.	.																											.	.	.	.	.	.
Alig confidence																																						.	.	.	.	.	.	.	.	.	.																											.	.	.	.	.	.
Template Conservation
Template Sequence		Q	E	Y	P	E	G	V	D	V	V	Y	E	S	V	G	G	A	M	F	D	L	A	V	D	A	L	A	T	K	G	R	L	I	V	I	G	F	I	S	G	Y	Q	T	P	T	G	L	S	P	V	K	A	G	T	L	P	A	K	L	L	K	K	S	A	S	V	Q	G	F	F	L	N	H	Y	L	S	K	Y	Q	A
Template Known Secondary structure					T	T									S																								G	G	G	T	T	S	S	S	S							T	T									T								G	G	G		G	G	G
Template Predicted Secondary structure
Template SS confidence
		226	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.
		295	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.							.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.
Predicted Secondary structure																			.	.	.	.	.	.
Query SS confidence																			.	.	.	.	.	.
Query Sequence		E	F	N	T	A	V	S	W	L	A	N	G	V	I	N	P	L	.	.	.	.	.	.	P	L	L	S	A	E	Y	P	F	T	D	L	E	E	A	L	R	F	A	G	D	K	T	Q	A	A	K	V	Q	L	V	F
Query Conservation																			.	.	.	.	.	.
Alig confidence																			.	.	.	.	.	.
Template Conservation
Template Sequence		A	M	S	H	L	L	E	M	C	V	S	G	D	L	V	C	E	V	D	L	G	D	L	S	P	E	G	R	F	T	G	L	E	S	I	F	R	A	V	N	Y	M	Y	M	G	K	N	T	G	K	I	V	V	E	L
Template Known Secondary structure												T	T	S	S							S	T	T	S	T	T		S		B	S	G	G	G										T	T				B
Template Predicted Secondary structure
Template SS confidence
		306	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions