Return to main results Retrieve Phyre Job Id

Job DescriptionP39346
Confidence100.00%DateThu Jan 5 11:59:35 GMT 2012
Rank49Aligned Residues299
% Identity13%Templatec1wlyA_
PDB info PDB header:oxidoreductaseChain: A: PDB Molecule:2-haloacrylate reductase; PDBTitle: crystal structure of 2-haloacrylate reductase
Resolution1.30 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   5....10.... .....20.... .....30.........40.........50.........60.........70. .......
Predicted Secondary structure 


...


.





















..





Query SS confidence 









. . .









.














































. .






Query Sequence  TQSCVVAGKK. . . TVAVTEQTID. WNNNGTLVQITRGGICGSDLHYYQEGKVGNFMIKAPMVLGHEVIGKV. . IHSDSSE
Query Conservation   

 
  
  ... 
   
 
 
.    





 
  

  
     
          
 
 
 
  
 
..

  
  
Alig confidence 









...









.
























..........











..






Template Conservation 


 
    
 
  
     
 
     





 
 


  
     
..........
 
 


  
 

  
  
  
Template Sequence  VMAAVIHKKGGPDNFVWEEVKVGSPGPGQVRLRNTAIGVNFLDTYHRAP. . . . . . . . . . PIVVGFEAAAVVEEVGPGVTD
Template Known Secondary structure 
SS
SSGGG






TT


..........




TT

S
Template Predicted Secondary structure 


















..........













Template SS confidence 















































































   2.......10.........20.........30.........40.........50 .........60.........70.
 
   7980.........90.........100.........110.........120.........130.........140.........150........
Predicted Secondary structure 

























































Query SS confidence 















































































Query Sequence  LHEGQTVAINPSKPCGHCKYCIEHNENQCTDMRFFGSAMYFPHVDGGFTRYKMVETSQCVPYPAKADEKVMAFAEPLAVA
Query Conservation    




                                         
                               
Alig confidence 
































...........................



















Template Conservation     
  
                          ...........................                    
Template Sequence  FTVGERVCTCLPPLGAYSQERLYPAEKLIKVPK. . . . . . . . . . . . . . . . . . . . . . . . . . . DLDLDDVHLAGLMLKGMTAQ
Template Known Secondary structure 

TT

SSS


SBSGGG


T...........................T



Template Predicted Secondary structure 














...........................



Template SS confidence 















































































   82.......90.........100.........110.... .....120.........130....
 
   159160.........170.........180.........190.........200.........210.........220........ .230......
Predicted Secondary structure 
































..




Query SS confidence 





































































. .







Query Sequence  IHAAHQAGELQGKRVFISGVGPIGCLIVSAVKTLGAAEIVCADVSPRSLSLGKEMGADVLVNPQNDDMDH. . WKAEKGYF
Query Conservation                                                             
          ..        
Alig confidence 





































































..







Template Conservation                                                                                  
Template Sequence  YLLHQTHKVKPGDYVLIHAAAGGMGHIMVPWARHLGATVIGTVSTEEKAETARKLGCHHTINYSTQDFAEVVREITGGKG
Template Known Secondary structure  TTS


TT
TTTTSTTTT
SST
STTTS
TT

Template Predicted Secondary structure 



































Template SS confidence 















































































   135....140.........150.........160.........170.........180.........190.........200.........210....
 
   237..240.........250.........260..... ....270.........280.........290.. .......300....
Predicted Secondary structure 








.













...........
Query SS confidence 




























.


























. . . . . . . . . . .











Query Sequence  DVSFEVSGHPSSVNTCLEVTRARGVMVQV. GMGGAMAEFPMMTLIGKEISLRGSFRF. . . . . . . . . . . TSEFNTAVSWLA
Query Conservation                               .                    
 
    ...........   
     

 
Alig confidence 




























.


























...........











Template Conservation     
                   
  
                                                     
Template Sequence  VDVVYDSIGKDTLQKSLDCLRPRGMCAAYGHASGVADPIRVVEDLGVRGSLFITRPALWHYMSNRSEIDEGSKCLFDAVK
Template Known Secondary structure 
S
TTTT


TT






TTTTTS



GGGGS
S
Template Predicted Secondary structure 
























Template SS confidence 















































































   215....220.........230.........240.........250.........260.........270.........280.........290....
 
   305....310.........320.........330.........340..
Predicted Secondary structure 















Query SS confidence 





































Query Sequence  NGVINPLPLLSAEYPFTDLEEALRFAGDKTQAAKVQLV
Query Conservation   
 
     
     
    

          




 
Alig confidence 






..




























Template Conservation   
 
   ..
     
    

   
  
   




 
Template Sequence  AGVLHSS. . VAKTFPLREAAAAHKYMGGRQTIGSIVLL
Template Known Secondary structure  TTS



..GGG
S

S
Template Predicted Secondary structure 






..





Template SS confidence 





































   295....300. ........310.........320.........330
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions