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Job DescriptionP39346
Confidence100.00%DateThu Jan 5 11:59:35 GMT 2012
Rank16Aligned Residues335
% Identity17%Templatec1kevB_
PDB info PDB header:oxidoreductaseChain: B: PDB Molecule:nadp-dependent alcohol dehydrogenase; PDBTitle: structure of nadp-dependent alcohol dehydrogenase
Resolution2.05 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   5....10.........20.... .....30.........40.........50.........60.........70. ........80.
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Query Sequence  TQSCVVAGKKTVAVTEQTID. WNNNGTLVQITRGGICGSDLHYYQEGKVGNFMIKAPMVLGHEVIGKV. . IHSDSSELHE
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Template Sequence  MKGFAMLGINKLGWIEKERPVAGSYDAIVRPLAVSPCTSDIHTVFEGA. . . LGDRKNMILGHEAVGEVVEVGSEVKDFKP
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T...T


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   1........10.........20.........30.........40........ .50.........60.........70.......
 
   82.......90.........100.........110.........120.........130.........140.........150.. .......160
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Query Sequence  GQTVAINPSKPCGHCKYCIEHNENQCTDMRFFGSAMYFPHVDGGFTRYKMVETSQCVPYPAKADEKVMAFA. EPLAVAIH
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Template Sequence  GDRVIVPCTTPDWRSLEVQAGFQQHSNGMLAGWKFSNFKDGVFGEYFHVNDADMNLAILPKDMPLENAVMITDMMTTGFH
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SSST
GGGTTSTTTT

BTTTB

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   78.80.........90.........100.........110.........120.........130.........140.........150.......
 
   161........170.........180.........190.........200.........210.........220........ .230.......
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Query Sequence  AAHQAGELQGKRVFISGVGPIGCLIVSAVKTLGAAEIVCADVSPRSLSLGKEMGADVLVNPQNDDMDH. . . WKAEKGYFD
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Template Sequence  GAELADIQMGSSVVVIGIGAVGLMGIAGAKLRGAGRIIGVGSRPICVEAAKFYGATDILNYKNGHIVDQVMKLTNGKGVD
Template Known Secondary structure  TT

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STTT
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T
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GGGS
TT

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   158.160.........170.........180.........190.........200.........210.........220.........230.......
 
   238.240.........250.........260.........270....... ..280.........290.. .......300.........310.
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Query Sequence  VSFEVSGHPSSVNTCLEVTRARGVMVQVGMGGAMAEFPMM. . . . TLIGKEISLRGSFRF. . TSEFNTAVSWLANGVINPL
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Template Sequence  RVIMAGGGSETLSQAVSMVKPGGIISNINYHGSGDALLIPRVEWGCGMAHKTIKGGLCPGGRLRAEMLRDMVVYNRVDLS
Template Known Secondary structure 
SS
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SSS




TTTTGGGTS






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GG
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   238.240.........250.........260.........270.........280.........290.........300.........310.......
 
   312...... .320.........330.... .....340..
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Query Sequence  PLLSAEY. PFTDLEEALRFAGDKT. QAAKVQLV
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Template Sequence  KLVTHVYHGFDHIEEALLLMKDKPKDLIKAVVI
Template Known Secondary structure  GGSGGG

TT
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   318.320.........330.........340.........350
 
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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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