Job Description P39346 Confidence 99.97% Date Thu Jan 5 11:59:35 GMT 2012 Rank 58 Aligned Residues 289 % Identity 15% Template c1iz0A_ PDB info PDB header:oxidoreductase Chain: A: PDB Molecule:quinone oxidoreductase; PDBTitle: crystal structures of the quinone oxidoreductase from2 thermus thermophilus hb8 and its complex with nadph Resolution 2.30 Å

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		6	.	.	.	10	.	.	.	.	.		.	.	.	.	20	.	.	.	.		.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.
Predicted Secondary structure												.										.
Query SS confidence												.										.
Query Sequence		Q	S	C	V	V	A	G	K	K	T	.	V	A	V	T	E	Q	T	I	D	.	W	N	N	N	G	T	L	V	Q	I	T	R	G	G	I	C	G	S	D	L	H	Y	Y	Q	E	G	K	V	G	N	F	M	I	K	A	P	M	V	L	G	H	E	V	I	G	K	V	I	H	S	D	S	S	E	L	H	E	G	Q
Query Conservation												.										.
Alig confidence												.										.																														.	.															.	.	.	.	.	.	.	.	.
Template Conservation																																																				.	.															.	.	.	.	.	.	.	.	.
Template Sequence		K	A	W	V	L	K	R	L	G	G	P	L	E	L	V	D	L	P	E	P	E	A	E	E	G	E	V	V	L	R	V	E	A	V	G	L	N	F	A	D	H	L	X	R	L	G	A	Y	L	T	.	.	R	L	H	P	P	F	I	P	G	X	E	V	V	G	.	.	.	.	.	.	.	.	.	V	V	E	G	R
Template Known Secondary structure								S	T	T	S														T	T																					T		S	S	S	.	.				S	S	B									.	.	.	.	.	.	.	.	.			T	T
Template Predicted Secondary structure																																																				.	.															.	.	.	.	.	.	.	.	.
Template SS confidence
		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.			.	.	.	.	.	.	.	.	60	.	.	.	.	.										.	.	.	.	70
		84	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		T	V	A	I	N	P	S	K	P	C	G	H	C	K	Y	C	I	E	H	N	E	N	Q	C	T	D	M	R	F	F	G	S	A	M	Y	F	P	H	V	D	G	G	F	T	R	Y	K	M	V	E	T	S	Q	C	V	P	Y	P	A	K	A	D	E	K	V	M	A	F	A	E	P	L	A	V	A	I	H	A	A	H
Query Conservation
Alig confidence								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		R	Y	A	A	L	V	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	P	Q	G	G	L	A	E	R	V	A	V	P	K	G	A	L	L	P	L	P	E	G	L	S	P	E	E	A	A	A	F	P	V	S	F	L	T	A	Y	L	A	L
Template Known Secondary structure								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S	S			S	B	S						G	G	G						T	T								T	S
Template Predicted Secondary structure								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		71	.	.	.	.	.																																	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.
		164	.	.	.	.	.	170	.	.	.	.	.	.	.	.		.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.
Predicted Secondary structure																	.
Query SS confidence																	.
Query Sequence		Q	A	G	E	L	Q	G	K	R	V	F	I	S	G	V	.	G	P	I	G	C	L	I	V	S	A	V	K	T	L	G	A	A	E	I	V	C	A	D	V	S	P	R	S	L	S	L	G	K	E	M	G	A	D	V	L	V	N	P	Q	N	D	D	M	D	H	W	K	A	E	K	G	Y	F	D	V	S	F	E	V
Query Conservation																	.
Alig confidence																	.																																																								.	.	.	.
Template Conservation																																																																									.	.	.	.
Template Sequence		K	R	A	Q	A	R	P	G	E	K	V	L	V	Q	A	A	A	G	A	L	G	T	A	A	V	Q	V	A	R	A	X	G	L	R	V	L	A	A	A	S	R	P	E	K	L	A	L	P	L	A	L	G	A	E	E	A	A	T	Y	A	E	V	P	E	R	A	K	A	W	G	G	.	.	.	.	L	D	L	V	L
Template Known Secondary structure				T	T			T	T						S	S	T	T	B													T	T								S	S	G	G	G	S						T	T		S					G	G	G								T	T	S	.	.	.	.
Template Predicted Secondary structure																																																																									.	.	.	.
Template SS confidence
		119	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.					190	.	.	.	.
		243	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.		.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.
Predicted Secondary structure																																																																	.
Query SS confidence																																																																	.
Query Sequence		S	G	H	P	S	S	V	N	T	C	L	E	V	T	R	A	R	G	V	M	V	Q	V	G	M	G	G	A	M	A	E	F	P	M	M	T	L	I	G	K	E	I	S	L	R	G	S	F	R	F	T	S	E	F	N	T	A	V	S	W	L	A	N	.	G	V	I	N	P	L	P	L	L	S	A	E	Y	P	F	T
Query Conservation																																																																	.
Alig confidence																										.																																							.
Template Conservation																										.
Template Sequence		E	V	R	G	K	E	V	E	E	S	L	G	L	L	A	H	G	G	R	L	V	Y	I	A	.	P	I	P	P	L	R	L	X	R	R	N	L	A	V	L	G	F	W	L	T	P	L	L	R	E	G	A	L	V	E	E	A	L	G	F	L	L	P	R	L	G	R	E	L	R	P	V	V	G	P	V	F	P	F	A
Template Known Secondary structure				S		T	T						T	T												.				T	T					T	T												T	T													G	G	G	B	T	T	T	B										G	G
Template Predicted Secondary structure																										.
Template SS confidence
		195	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.		.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.
		322	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	L	E	E	A	L	R	F	A	G	D	K	T	Q	A	A	K	V	Q	L	V
Query Conservation
Alig confidence
Template Conservation
Template Sequence		E	A	E	A	A	F	R	A	L	L	D	R	G	H	T	G	K	V	V	V	R
Template Known Secondary structure		G								T	T		T	T			B
Template Predicted Secondary structure
Template SS confidence
		281	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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