 |
Job Description | P05847 | Confidence | 9.19% | Date | Thu Jan 5 10:58:59 GMT 2012 |
Rank | 97 | Aligned Residues | 106 |
% Identity | 18% | Template | d1rypb_ |
SCOP info | Ntn hydrolase-like
| N-terminal nucleophile aminohydrolases (Ntn hydrolases)
| Proteasome subunits
|
Resolution | 1.90 |
|
 |
  |   |
84 | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | |
|
|
|
. | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . | . | . | . | . | 150 | . | . | . | . | . | . | . | . | |
Predicted Secondary structure |   |
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |
|
|
|
|
|
| . |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
Query Sequence |   |
G | S | R | F | P | L | L | G | E | L | Q | S | I | L | K | Q | A | V | E | E | A | T | V | K | A | P | L | R | H | N | A | V | E | I | F | . |
. |
. |
. |
D | E | V | N | T | G | K | N | T | G | S | G | V | P | W | V | T | W | D | I | I | P | D | N | D | D | A | E | I | E | V | Y | M | A | G | G | G | C | T | L | . |
Query Conservation |   |
|   |   |   |   |   |   |
|   |
|   |   |
|
|   |   |
|
|   |   |
|   |   |   |   |
|
|
|
|
|   |
|   |
|
| . | . | . | . |   |
|   |
|
|   |
|
|
|
|   |   |   |
|   |
|   |   |   |   |   |   |   |
|
|   |   |   |
|   |   |   |   |
|
|
|
|
|
|
| . |
Alig confidence |   |
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . |
|
|
|
| . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
Template Conservation |   |
  |   |   |
|   |   |   | . |   |
|
|   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |
|
|   |   |
|   |   |
|
|   |
|   |
|   |   |   | . | . | . | . | . | . | . | . | . |   |
|   |
|
|   |   |
|
|   |
|   |   |   |   |   |   |   |   |
|   |
|   |
|   |   |   |   |
Template Sequence |   |
G | E | Y | P | P | T | K | . |
L | L | V | S | E | V | A | K | I | M | Q | E | A | T | Q | S | G | G | V | R | P | F | G | V | S | L | L | I | A | G | H | D | E | F | N | . |
. |
. |
. |
. |
. |
. |
. |
. |
G | F | S | L | Y | Q | V | D | P | S | G | S | Y | F | P | W | K | A | T | A | I | G | K | G | S | V | A | A |
Template Known Secondary structure |   |
S | S |
|
|
|  |  | . |  |  |  |  |  |  |  |  |  |  |  |  | T | T | T | S | B | T |
|
|
|
|
|  |  |  |  |  |  |  |  |  | T | T | T | . | . | . | . | . | . | . | . | . |  |  |  |  |  |  |  |
| T | T | S |
|  |  |  |
| S |  |  |  |  | S | T | T |  |  |  |  |
Template Predicted Secondary structure |   |
|
|
|
|
|  |  | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |
|
|
| . | . | . | . | . | . | . | . | . |
|  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |
|
|  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
102 | . | . | . | . | . | . | |
. | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | |
|
|
|
|
|
|
|
|
. | . | . | . | . | . | 150 | . | . | . | . | . | . | . | . | . | 160 | . | . | . | . | . | . | . | . | . | 170 | . |
  |
  |   |
159 | 160 | . | . | . | . | . | . | . | . | . | |
170 | . | . | . | . | . | . | . | . | . | 180 | . | . | . | . | . | . | . | . | . | 190 | . | . | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
|
|
|  |  |  |  |
|
|
|
| . |
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|  |  |  |  |  |  |
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
P | G | R | S | K | V | L | M | P | S | E | . |
G | Y | E | G | V | V | K | F | V | F | E | N | I | S | T | L | A | V | N | A | C | P | P | V | L | V | G | V | G | I |
Query Conservation |   |
  |
|   |
|   |   |
|   |
|   |   | . |   |   |
|
|
|   |   |
|
|
|   |   |
|   |   |
|
|   |   |   |
|
|
|   |   |
|
|
|
|
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |   |
|
|   |   |   |   |   |   |
|
|   |
|
|
|
|   |
|   |   |   |   |
|   |   |   |   |   |   |
|   |   |   |   |   |
|
|
|   |
|
Template Sequence |   |
K | T | F | L | E | K | R | W | N | D | E | L | E | L | E | D | A | I | H | I | A | L | L | T | L | K | E | S | V | E | G | E | F | N | G | D | T | I | E | L | A | I |
Template Known Secondary structure |   |
 |  |  |  |  |  |  |
|
| T | T |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
| S |
|
| S | T | T | T |  |  |  |  |  |
Template Predicted Secondary structure |   |
 |  |  |  |  |  |
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
172 | . | . | . | . | . | . | . | 180 | . | . | . | . | . | . | . | . | . | 190 | . | . | . | . | . | . | . | . | . | 200 | . | . | . | . | . | . | . | . | . | 210 | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|