Job Description P05847 Confidence 13.35% Date Thu Jan 5 10:58:59 GMT 2012 Rank 60 Aligned Residues 59 % Identity 15% Template c3kz4A_ PDB info PDB header:virus Chain: A: PDB Molecule:inner capsid protein vp2; PDBTitle: crystal structure of the rotavirus double layered particle Resolution 3.80 Å

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		14	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.		.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.
Predicted Secondary structure																																					.
Query SS confidence																																					.
Query Sequence		L	T	E	I	V	A	N	F	T	A	M	I	S	T	R	M	P	D	D	V	V	D	K	L	K	Q	L	K	D	A	E	T	S	S	M	.	G	K	I	I	Y	H	T	M	F	D	N	M	Q	K	A	I	D	L	N	R	P	A	C	Q
Query Conservation																																					.
Alig confidence																																					.
Template Conservation
Template Sequence		V	E	D	F	L	K	R	L	H	I	F	D	V	A	R	V	P	D	D	Q	M	Y	R	L	R	D	R	L	R	L	L	P	V	E	V	R	R	L	D	I	F	N	L	I	L	M	N	M	D	Q	I	E	R	A	S	D	K	I	A	Q
Template Known Secondary structure								T	S	T	T			G	G	G	S		S	T	T									T	T																								S	S	S	S			S
Template Predicted Secondary structure
Template SS confidence
		642	.	.	.	.	.	.	.	650	.	.	.	.	.	.	.	.	.	660	.	.	.	.	.	.	.	.	.	670	.	.	.	.	.	.	.	.	.	680	.	.	.	.	.	.	.	.	.	690	.	.	.	.	.	.	.	.	.	700	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions