Job Description P05847 Confidence 13.82% Date Thu Jan 5 10:58:59 GMT 2012 Rank 57 Aligned Residues 165 % Identity 14% Template c3i7fA_ PDB info PDB header:ligase Chain: A: PDB Molecule:aspartyl-trna synthetase; PDBTitle: aspartyl trna synthetase from entamoeba histolytica Resolution 2.80 Å

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		11	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90
Predicted Secondary structure
Query SS confidence
Query Sequence		V	N	K	L	T	E	I	V	A	N	F	T	A	M	I	S	T	R	M	P	D	D	V	V	D	K	L	K	Q	L	K	D	A	E	T	S	S	M	G	K	I	I	Y	H	T	M	F	D	N	M	Q	K	A	I	D	L	N	R	P	A	C	Q	D	T	G	E	I	M	F	F	V	K	V	G	S	R	F	P	L	L
Query Conservation
Alig confidence																																																												.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																																												.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		C	I	D	V	M	E	K	L	F	T	F	I	F	D	E	I	P	K	R	F	P	D	E	L	K	V	I	R	K	Q	Y	P	F	E	D	L	I	Y	R	P	F	L	R	L	T	Y	K	E	A	I	E	M	L	R	A	S	G	E	.	.	.	.	.	.	.	.	.	.	.	.	.	T	I	G	D	Y	D	D	F	T
Template Known Secondary structure																																S									S																T	T		.	.	.	.	.	.	.	.	.	.	.	.	.				T	T
Template Predicted Secondary structure																																																												.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		346	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.														.	.	.	.	.	.	410	.	.
		91	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110					.	.	.	.	.	.	.	.		.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.
Predicted Secondary structure																						.	.	.	.									.
Query SS confidence																						.	.	.	.									.
Query Sequence		G	E	L	Q	S	I	L	K	Q	A	V	E	E	A	T	V	K	A	P	L	.	.	.	.	R	H	N	A	V	E	I	F	.	D	E	V	N	T	G	K	N	T	G	S	G	V	P	W	V	T	W	D	I	I	P	D	N	D	D	A	E	I	E	V	Y	M	A	G	G	G	C	T	L	P	G	R	S	K	V	L
Query Conservation																						.	.	.	.									.
Alig confidence																						.	.	.	.									.										.	.	.	.												.	.				.	.	.	.	.
Template Conservation																																												.	.	.	.												.	.				.	.	.	.	.
Template Sequence		T	P	Q	E	V	K	L	G	E	L	I	K	A	K	Y	N	T	D	F	Y	I	L	D	K	F	P	A	A	I	R	P	F	Y	T	M	P	D	I	D	D	P	N	.	.	.	.	Y	S	N	S	Y	D	V	F	V	R	G	.	.	Q	E	I	.	.	.	.	.	T	S	G	A	Q	R	I	H	D	P	E	F	L
Template Known Secondary structure																			S								B	G	G	G	S		T	T	B		B		S	S		T	T	.	.	.	.	B	B	S							T	T	.	.				.	.	.	.	.
Template Predicted Secondary structure																																												.	.	.	.												.	.				.	.	.	.	.
Template SS confidence
		413	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.					.	.	.	.	.	460	.	.	.	.	.			.	.	.						.	470	.	.	.	.	.	.	.	.	.	480	.
		166	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200
Predicted Secondary structure
Query SS confidence
Query Sequence		M	P	S	E	G	Y	E	G	V	V	K	F	V	F	E	N	I	S	T	L	A	V	N	A	C	P	P	V	L	V	G	V	G	I	A
Query Conservation
Alig confidence																															.
Template Conservation																															.
Template Sequence		M	K	R	C	I	E	K	G	V	D	P	A	T	L	K	D	Y	I	E	S	F	R	F	G	S	W	P	H	A	.	G	C	G	I	G
Template Known Secondary structure								T	T			G	G	G	G						T	T	S	S							.
Template Predicted Secondary structure																															.
Template SS confidence
		482	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510		.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions