Job Description P05847 Confidence 43.61% Date Thu Jan 5 10:58:59 GMT 2012 Rank 7 Aligned Residues 161 % Identity 16% Template c1wydB_ PDB info PDB header:ligase Chain: B: PDB Molecule:hypothetical aspartyl-trna synthetase; PDBTitle: crystal structure of aspartyl-trna synthetase from sulfolobus tokodaii Resolution 2.30 Å

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		11	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90
Predicted Secondary structure
Query SS confidence
Query Sequence		V	N	K	L	T	E	I	V	A	N	F	T	A	M	I	S	T	R	M	P	D	D	V	V	D	K	L	K	Q	L	K	D	A	E	T	S	S	M	G	K	I	I	Y	H	T	M	F	D	N	M	Q	K	A	I	D	L	N	R	P	A	C	Q	D	T	G	E	I	M	F	F	V	K	V	G	S	R	F	P	L	L
Query Conservation
Alig confidence																																																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		Y	N	D	V	M	Q	L	L	E	K	I	L	H	N	I	V	K	T	I	K	E	E	G	K	E	E	L	K	I	L	N	Y	E	P	P	E	V	K	I	P	I	K	R	L	K	Y	T	E	A	I	E	I	L	R	S	K	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	Y	N	I	K	F	G
Template Known Secondary structure																								S								T								S	S																T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T					T	T
Template Predicted Secondary structure																																																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		235	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290																		.	.	.	.	.	.	.
		91	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110					.	.	.	.	.	.	.	.		.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.
Predicted Secondary structure																						.	.	.	.									.
Query SS confidence																						.	.	.	.									.
Query Sequence		G	E	L	Q	S	I	L	K	Q	A	V	E	E	A	T	V	K	A	P	L	.	.	.	.	R	H	N	A	V	E	I	F	.	D	E	V	N	T	G	K	N	T	G	S	G	V	P	W	V	T	W	D	I	I	P	D	N	D	D	A	E	I	E	V	Y	M	A	G	G	G	C	T	L	P	G	R	S	K	V	L
Query Conservation																						.	.	.	.									.
Alig confidence																						.	.	.	.									.										.	.	.	.												.	.				.	.	.	.	.
Template Conservation																																												.	.	.	.												.	.				.	.	.	.	.
Template Sequence		D	D	I	G	T	P	E	L	R	I	L	N	E	E	L	K	E	D	L	Y	F	I	V	D	W	P	S	D	A	R	P	F	Y	T	K	S	K	S	E	N	P	E	.	.	.	.	L	S	E	S	F	D	L	I	Y	K	F	.	.	L	E	I	.	.	.	.	.	V	S	G	S	T	R	N	H	K	R	E	V	L
Template Known Secondary structure																	S		S								B	G	G	G	S		T	T	B		B		S	S		T	T	.	.	.	.	B	B	S							T	T	.	.				.	.	.	.	.						B			S
Template Predicted Secondary structure																																												.	.	.	.												.	.				.	.	.	.	.
Template SS confidence
		298	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.					340	.	.	.	.	.	.	.	.	.	350			.	.	.						.	.	.	.	.	.	360	.	.	.	.	.	.
		166	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200
Predicted Secondary structure
Query SS confidence
Query Sequence		M	P	S	E	G	Y	E	G	V	V	K	F	V	F	E	N	I	S	T	L	A	V	N	A	C	P	P	V	L	V	G	V	G	I	A
Query Conservation
Alig confidence																													.
Template Conservation																													.
Template Sequence		E	E	A	L	K	K	K	G	L	K	P	E	S	F	E	F	F	L	K	W	F	D	Y	G	M	P	P	.	H	A	G	F	G	M	G
Template Known Secondary structure							T	T	T			G	G	G	G					G	G	G	G	S					.
Template Predicted Secondary structure																													.
Template SS confidence
		367	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.		.	.	.	.	.	.	400

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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