Job Description P05847 Confidence 32.07% Date Thu Jan 5 10:58:59 GMT 2012 Rank 16 Aligned Residues 160 % Identity 14% Template c1b8aB_ PDB info PDB header:ligase Chain: B: PDB Molecule:protein (aspartyl-trna synthetase); PDBTitle: aspartyl-trna synthetase Resolution 1.90 Å

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		11	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90
Predicted Secondary structure
Query SS confidence
Query Sequence		V	N	K	L	T	E	I	V	A	N	F	T	A	M	I	S	T	R	M	P	D	D	V	V	D	K	L	K	Q	L	K	D	A	E	T	S	S	M	G	K	I	I	Y	H	T	M	F	D	N	M	Q	K	A	I	D	L	N	R	P	A	C	Q	D	T	G	E	I	M	F	F	V	K	V	G	S	R	F	P	L	L
Query Conservation
Alig confidence																																																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		E	E	E	V	M	S	F	L	E	R	L	V	A	H	A	I	N	Y	V	R	E	H	N	A	K	E	L	D	I	L	N	F	E	L	E	E	P	K	L	P	F	P	R	V	S	Y	D	K	A	L	E	I	L	G	D	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	L	G	K	E	I	P	W	G
Template Known Secondary structure																															T	T								S	S																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T	T					T	T
Template Predicted Secondary structure																																																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		1240	.	.	.	.	.	.	.	.	.	1250	.	.	.	.	.	.	.	.	.	1260	.	.	.	.	.	.	.	.	.	1270	.	.	.	.	.	.	.	.	.	1280	.	.	.	.	.	.	.	.	.	1290	.	.	.	.																		.	.	.	.	.	1300	.	.
		91	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.									.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.			.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160
Predicted Secondary structure																			.	.	.	.	.	.	.	.																												.	.
Query SS confidence																			.	.	.	.	.	.	.	.																												.	.
Query Sequence		G	E	L	Q	S	I	L	K	Q	A	V	E	E	A	T	V	K	.	.	.	.	.	.	.	.	A	P	L	R	H	N	A	V	E	I	F	D	E	V	N	T	G	K	N	T	G	S	G	V	P	W	V	.	.	T	W	D	I	I	P	D	N	D	D	A	E	I	E	V	Y	M	A	G	G	G	C	T	L	P	G
Query Conservation																			.	.	.	.	.	.	.	.																												.	.
Alig confidence																			.	.	.	.	.	.	.	.																				.	.	.	.	.				.	.									.	.				.	.	.	.	.
Template Conservation																																														.	.	.	.	.														.	.				.	.	.	.	.
Template Sequence		E	D	I	D	T	E	G	E	R	L	L	G	K	Y	M	M	E	N	E	N	A	P	L	Y	F	L	Y	Q	Y	P	S	E	A	K	P	F	Y	I	M	K	Y	D	N	K	.	.	.	.	.	P	E	I	C	R	A	F	D	L	E	Y	R	G	.	.	V	E	I	.	.	.	.	.	S	S	G	G	Q	R	E	H
Template Known Secondary structure		S																					S						S		B	G	G	G	S		T	T	B				T	T		.	.	.	.	.					S							T	T	.	.				.	.	.	.	.						B
Template Predicted Secondary structure																																														.	.	.	.	.														.	.				.	.	.	.	.
Template SS confidence
		1303	.	.	.	.	.	.	1310	.	.	.	.	.	.	.	.	.	1320	.	.	.	.	.	.	.	.	.	1330	.	.	.	.	.	.	.	.	.	1340	.	.	.	.	.	.						.	.	.	1350	.	.	.	.	.	.	.	.	.			1360	.	.						.	.	.	.	.	.	.	1370
		161	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200
Predicted Secondary structure
Query SS confidence
Query Sequence		R	S	K	V	L	M	P	S	E	G	Y	E	G	V	V	K	F	V	F	E	N	I	S	T	L	A	V	N	A	C	P	P	V	L	V	G	V	G	I	A
Query Conservation
Alig confidence																																				.
Template Conservation																																				.
Template Sequence		R	H	D	I	L	V	E	Q	I	K	E	K	G	L	N	P	E	S	F	E	F	Y	L	K	A	F	R	Y	G	M	P	P	H	G	.	G	F	G	L	G
Template Known Secondary structure													T	T			G	G	G	G					G	G	G	S	S							.
Template Predicted Secondary structure																																				.
Template SS confidence
		1371	.	.	.	.	.	.	.	.	1380	.	.	.	.	.	.	.	.	.	1390	.	.	.	.	.	.	.	.	.	1400	.	.	.	.		.	.	.	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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