Job Description P28246 Confidence 100.00% Date Thu Jan 5 11:44:30 GMT 2012 Rank 2 Aligned Residues 391 % Identity 14% Template d1pw4a_ SCOP info MFS general substrate transporter MFS general substrate transporter Glycerol-3-phosphate transporter Resolution 3.30

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		5	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Q	H	S	S	F	A	I	V	F	I	L	G	L	L	A	M	L	M	P	L	S	I	D	M	Y	L	P	A	L	P	V	I	S	A	Q	F	G	V	P	A	G	S	T	Q	M	T	L	S	T	Y	I	L	G	F	A	L	G	Q	L	I	Y	G	P	M	A	D	S	F	G	R	K	P	V	V	L	G	G	T	L	V
Query Conservation
Alig confidence																																		.
Template Conservation																																		.
Template Sequence		R	R	L	R	W	Q	I	F	L	G	I	F	F	G	Y	A	A	Y	Y	L	V	R	K	N	F	A	L	A	M	P	Y	L	.	V	E	Q	G	F	S	R	G	D	L	G	F	A	L	S	G	I	S	I	A	Y	G	F	S	K	F	I	M	G	S	V	S	D	R	S	N	P	R	V	F	L	P	A	G	L	I	L
Template Known Secondary structure																								T	S								T	.	T	S	S	T	T		S	S																											S
Template Predicted Secondary structure																																		.
Template SS confidence
		24	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.		.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.
		85	.	.	.	.	90	.	.					.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160
Predicted Secondary structure										.	.	.	.
Query SS confidence										.	.	.	.
Query Sequence		F	A	A	A	A	V	A	C	.	.	.	.	A	L	A	N	T	I	D	Q	L	I	V	M	R	F	F	H	G	L	A	A	A	A	A	S	V	V	I	N	A	L	M	R	D	I	Y	P	K	E	E	F	S	R	M	M	S	F	V	M	L	V	T	T	I	A	P	L	M	A	P	I	V	G	G	W	V	L	V	W
Query Conservation										.	.	.	.
Alig confidence										.	.	.	.
Template Conservation
Template Sequence		A	A	A	V	M	L	F	M	G	F	V	P	W	A	T	S	S	I	A	V	M	F	V	L	L	F	L	C	G	W	F	Q	G	M	G	W	P	P	C	G	R	T	M	V	H	W	W	S	Q	K	E	R	G	G	I	V	S	V	W	N	C	A	H	N	V	G	G	G	I	P	P	L	L	F	L	L	G	M	A	W
Template Known Secondary structure																	S	S	S	S																T										T	T		T	T	T																		T	S
Template Predicted Secondary structure
Template SS confidence
		103	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.
		161	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.						.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.
Predicted Secondary structure																																																		.	.	.	.	.
Query SS confidence																																																		.	.	.	.	.
Query Sequence		L	S	W	H	Y	I	F	W	I	L	A	L	A	A	I	L	A	S	A	M	I	F	F	L	I	K	E	T	L	P	P	E	R	R	Q	P	F	H	I	R	T	T	I	G	N	F	A	A	.	.	.	.	.	L	F	R	H	K	R	V	L	S	Y	M	L	A	S	G	F	S	F	A	G	M	F	S	F	L	S	A
Query Conservation																																																		.	.	.	.	.
Alig confidence																																																		.	.	.	.	.
Template Conservation
Template Sequence		F	N	D	W	H	A	A	L	Y	M	P	A	F	C	A	I	L	V	A	L	F	A	F	A	M	M	R	D	T	P	Q	S	C	G	L	P	P	I	E	E	Y	K	N	D	T	A	K	Q	I	F	M	Q	Y	V	L	P	N	K	L	L	W	Y	I	A	I	A	N	V	F	V	Y	L	L	R	Y	G	I	L	D	W
Template Known Secondary structure		T			S	T	T		T																					S	S	T	T	T				S		T	T	T						T							T	S	S
Template Predicted Secondary structure
Template SS confidence
		183	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.
		236	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.		.	.	.	.	.	.	310	.	.	.	.
Predicted Secondary structure																																																																						.
Query SS confidence																																																																						.
Query Sequence		G	P	F	V	Y	I	E	I	N	H	V	A	P	E	N	F	G	Y	Y	F	A	L	N	I	V	F	L	F	V	M	T	I	F	N	S	R	F	V	R	R	I	G	A	L	N	M	F	R	S	G	L	W	I	Q	F	I	M	A	A	W	M	V	I	S	A	L	L	G	.	L	G	F	W	S	L	V	V	G	V	A
Query Conservation																																																																						.
Alig confidence																																																																						.
Template Conservation
Template Sequence		S	P	T	Y	L	K	E	V	K	H	F	A	L	D	K	S	S	W	A	Y	F	L	Y	E	Y	A	G	I	P	G	T	L	L	C	G	W	M	S	D	K	V	F	R	G	N	R	G	A	T	G	V	F	F	M	T	L	V	T	I	A	T	I	V	Y	W	M	N	P	A	G	N	P	T	V	D	M	I	C	M	I
Template Known Secondary structure						B	T	T	B	S																																T	S	T	T																				T	T	S			T	T
Template Predicted Secondary structure
Template SS confidence
		276	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.
		315	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.		.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.				.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390
Predicted Secondary structure																								.																																	.	.	.
Query SS confidence																								.																																	.	.	.
Query Sequence		A	F	V	G	C	V	S	M	V	S	S	N	A	M	A	V	I	L	D	E	F	P	.	H	M	A	G	T	A	S	S	L	A	G	T	F	R	F	G	I	G	A	I	V	G	A	L	L	S	L	A	T	F	N	S	.	.	.	A	W	P	M	I	W	S	I	A	F	C	A	T	S	S	I	L	F	C	L	Y	A
Query Conservation																								.																																	.	.	.
Alig confidence																								.																																	.	.	.
Template Conservation
Template Sequence		V	I	G	F	L	I	Y	G	P	V	M	L	I	G	L	H	A	L	E	L	A	P	K	K	A	A	G	T	A	A	G	F	T	G	L	F	G	Y	L	G	G	S	V	A	A	S	A	I	V	G	Y	T	V	D	F	F	G	W	D	G	G	F	M	V	M	I	G	G	S	I	L	A	V	I	L	L	I	V	V	M
Template Known Secondary structure								T													T	S		T	T																															S	S		S
Template Predicted Secondary structure
Template SS confidence
		356	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.
		391	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	R	P	K	K	R
Query Conservation
Alig confidence
Template Conservation
Template Sequence		I	G	E	K	R	R
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		436	.	.	.	440	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions