Job Description P76482 Confidence 100.00% Date Thu Jan 5 12:23:24 GMT 2012 Rank 2 Aligned Residues 280 % Identity 20% Template c3pb6X_ PDB info PDB header:transferase Chain: X: PDB Molecule:glutaminyl-peptide cyclotransferase-like protein; PDBTitle: crystal structure of the catalytic domain of human golgi-resident2 glutaminyl cyclase at ph 6.5 Resolution 1.05 Å

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		20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.			.	.	80	.	.	.	.	.	.	.	.	.	90					.	.	.
Predicted Secondary structure																																																												.	.														.	.	.	.
Query SS confidence																																																												.	.														.	.	.	.
Query Sequence		I	F	Y	Q	P	W	V	N	A	L	P	S	T	P	R	H	A	S	P	E	Q	L	E	K	T	V	R	Y	L	T	Q	T	V	H	P	R	S	A	D	N	I	D	N	L	N	R	S	A	E	Y	I	K	E	V	F	V	S	S	.	.	G	A	R	V	T	S	Q	D	V	P	I	T	G	.	.	.	.	G	P	Y
Query Conservation																																																												.	.														.	.	.	.
Alig confidence																										.	.	.																																.	.														.	.	.	.
Template Conservation																										.	.	.
Template Sequence		L	I	G	S	L	P	E	A	R	L	R	R	V	V	G	Q	L	D	P	Q	R	L	W	S	.	.	.	T	Y	L	R	P	L	L	V	V	R	T	P	G	S	P	G	N	L	Q	V	R	K	F	L	E	A	T	L	R	S	L	T	A	G	W	H	V	E	L	D	P	F	T	A	S	T	P	L	G	P	V	D	F
Template Known Secondary structure			T	T													T									.	.	.		T	T	G	G	G		S				T	T	S																	S	T	T														T	T
Template Predicted Secondary structure																										.	.	.
Template SS confidence
		72	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.				.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.
		94	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.								.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.
Predicted Secondary structure																																																									.	.	.	.	.	.	.
Query SS confidence																																																									.	.	.	.	.	.	.
Query Sequence		K	N	I	V	A	D	Y	G	P	A	D	G	P	L	I	I	I	G	A	H	Y	D	S	A	S	S	Y	E	N	D	Q	L	T	Y	T	P	G	A	D	D	N	A	S	G	V	A	G	L	L	E	L	A	R	L	L	.	.	.	.	.	.	.	H	Q	Q	V	P	K	T	G	V	Q	L	V	A	Y	A	S	E	E
Query Conservation																																																									.	.	.	.	.	.	.
Alig confidence																												.	.																												.	.	.	.	.	.	.
Template Conservation																												.	.
Template Sequence		G	N	V	V	A	T	L	D	P	R	A	A	R	H	L	T	L	A	C	H	Y	D	S	K	L	F	.	.	P	P	G	S	T	P	F	V	G	A	T	D	S	A	V	P	C	A	L	L	L	E	L	A	Q	A	L	D	L	E	L	S	R	A	K	K	Q	A	A	P	V	T	L	Q	L	L	F	L	D	G	E	E
Template Known Secondary structure								S		T	T	S	S															.	.		T	T	S						T	T	T	T														T										T	T		S									S			S
Template Predicted Secondary structure																												.	.
Template SS confidence
		149	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.			.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.
		167									.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.							.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.
Predicted Secondary structure			.	.	.	.	.	.	.	.																	.	.	.	.	.	.
Query SS confidence			.	.	.	.	.	.	.	.																	.	.	.	.	.	.
Query Sequence		P	.	.	.	.	.	.	.	.	P	F	F	R	S	D	E	M	G	S	A	V	H	A	A	S	.	.	.	.	.	.	L	E	R	P	V	K	L	M	I	A	L	E	M	I	G	Y	Y	D	S	A	P	G	S	Q	N	Y	P	Y	P	A	M	S	W	L	Y	P	D	R	G	D	F	I	A	V	V	G	R	I	Q
Query Conservation			.	.	.	.	.	.	.	.																	.	.	.	.	.	.
Alig confidence			.	.	.	.	.	.	.	.																	.	.	.	.	.	.																																				.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																																																				.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		A	L	K	E	W	G	P	K	D	S	L	Y	G	S	R	H	L	A	Q	L	M	E	S	I	P	H	S	P	G	P	T	R	I	Q	A	I	E	L	F	M	L	L	D	L	L	G	A	P	N	P	T	F	Y	S	H	F	P	R	T	V	R	W	F	H	R	L	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure			S	S			S	T	T	S	S														S	B		S	S		S	B	T	T	T	T									S		S	S	S	S			B					G	G	G								.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																																																				.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		227	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.
		233	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	I	N	A	V	R	Q	V	K	A	A	L	L	S	S	Q	D	L	S	V	Y	S	M	N	T	P	G	F	I	P	G	I	D	F	S	D	H	L	N	Y	W	Q	H	D	I	P	A	I	M	I	T	D	T	A	F	Y	R	N	K	Q	Y	H	L	P	G	D	T	A	D	R	L	N	Y	Q	K	M	A	Q	V	V
Query Conservation
Alig confidence		.																																																							.	.
Template Conservation		.																																																							.	.
Template Sequence		.	R	S	I	E	K	R	L	H	R	L	N	L	L	Q	S	H	P	Q	E	V	M	Y	F	Q	P	G	E	P	F	G	S	V	E	D	D	H	I	P	F	L	R	R	G	V	P	V	L	H	L	I	S	T	P	F	.	.	P	A	V	W	H	T	P	A	D	T	E	V	N	L	H	P	P	T	V	H	N	L	C
Template Known Secondary structure		.										T	T			S	S			S	S		S	S	B		S	S		S	S				S		T	T					T	T	T									S	S		.	.		T	T	T	T	S	T	T		S	G	G	G	S
Template Predicted Secondary structure		.																																																							.	.
Template SS confidence
			293	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.			.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.
		313	.	.	.	.	.	.	320	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	G	V	I	T	L	L	Y	N
Query Conservation
Alig confidence
Template Conservation
Template Sequence		R	I	L	A	V	F	L	A	E
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		370	.	.	.	.	.	.	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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