Job Description P76482 Confidence 99.52% Date Thu Jan 5 12:23:24 GMT 2012 Rank 48 Aligned Residues 245 % Identity 19% Template c3kl9F_ PDB info PDB header:hydrolase Chain: F: PDB Molecule:glutamyl aminopeptidase; PDBTitle: crystal structure of pepa from streptococcus pneumoniae Resolution 2.70 Å

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		41	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.			.	.	.	.	.	.	110	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																																	.	.
Query SS confidence																																																																	.	.
Query Sequence		L	E	K	T	V	R	Y	L	T	Q	T	V	H	P	R	S	A	D	N	I	D	N	L	N	R	S	A	E	Y	I	K	E	V	F	V	S	S	G	A	R	V	T	S	Q	D	V	P	I	T	G	G	P	Y	K	N	I	V	A	D	Y	G	P	A	.	.	D	G	P	L	I	I	I	G	A	H	Y	D	S	A	S
Query Conservation																																																																	.	.
Alig confidence																.	.	.	.	.																													.	.	.	.	.	.	.										.	.
Template Conservation																.	.	.	.	.																													.	.	.	.	.	.	.
Template Sequence		L	F	S	K	I	K	E	V	T	E	L	A	A	V	.	.	.	.	.	S	G	H	E	A	P	V	R	A	Y	L	R	E	K	L	T	P	H	V	D	E	V	V	T	D	G	L	G	.	.	.	.	.	.	.	G	I	F	G	I	K	H	S	E	A	V	D	A	P	R	V	L	V	A	S	H	M	D	E	V	G
Template Known Secondary structure											T	S			B	.	.	.	.	.	T	T														G	G	G		S						T	T	S	.	.	.	.	.	.	.										S	T	T												B
Template Predicted Secondary structure																.	.	.	.	.																													.	.	.	.	.	.	.
Template SS confidence
		4	.	.	.	.	.	10	.	.	.	.	.	.	.						.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.								.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.
		119	120	.	.	.
Predicted Secondary structure							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		S	Y	E	N	D	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Conservation							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		F	M	V	S	E	I	K	P	D	G	T	F	R	V	V	E	I	G	G	W	N	P	M	V	V	S	S	Q	R	F	K	L	L	T	R	D	G	H	E	I	P	V	I	S	G	P	A	I	A	D	I	V	F	D	G	G	F	A	D	K	A	E	A	E	S	F	G	I	R	P	G	D	T	I	V	P	D	S	S	A
Template Known Secondary structure									T	T	S								S				G	G	G		S	S								T	T	S											G	G	G	S							S	S							T	T			T	T
Template Predicted Secondary structure
Template SS confidence
		72	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.
							124	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.
Predicted Secondary structure		.	.	.	.	.
Query SS confidence		.	.	.	.	.
Query Sequence		.	.	.	.	.	Q	L	T	Y	T	P	G	A	D	D	N	A	S	G	V	A	G	L	L	E	L	A	R	L	L	H	Q	Q	V	P	K	T	G	V	Q	L	V	A	Y	A	S	E	E	P	P	F	F	R	S	D	E	M	G	S	A	V	H	A	A	S	L	E	R	P	V	K	L	M	I	A	L	E	M	I	G
Query Conservation		.	.	.	.	.
Alig confidence		.	.	.	.	.
Template Conservation
Template Sequence		I	L	T	A	N	E	K	N	I	I	S	K	A	W	D	N	R	Y	G	V	L	M	V	S	E	L	A	E	A	L	S	G	Q	K	L	G	N	E	L	Y	L	G	S	N	V	Q	E	E	V	G	L	R	G	A	H	T	S	T	T	K	F	D	P	E	V	F	L	A	V	D	C	S	P	A	G	D	V	Y	G	G
Template Known Secondary structure					T	T	S	S					S																		T	S	S				S	S								S			T	T	T	S													S												G	G	G	T
Template Predicted Secondary structure
Template SS confidence
		167	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.
		199	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.			.
Predicted Secondary structure																																																																															.	.
Query SS confidence																																																																															.	.
Query Sequence		Y	Y	D	S	A	P	G	S	Q	N	Y	P	Y	P	A	M	S	W	L	Y	P	D	R	G	D	F	I	A	V	V	G	R	I	Q	D	I	N	A	V	R	Q	V	K	A	A	L	L	S	S	Q	D	L	S	V	Y	S	M	N	T	P	G	F	I	P	G	I	D	F	S	D	H	L	N	Y	W	Q	H	.	.	D
Query Conservation																																																																															.	.
Alig confidence													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																															.	.	.	.	.	.	.															.	.
Template Conservation													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																															.	.	.	.	.	.	.
Template Sequence		Q	G	K	I	G	D	G	T	L	I	R	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	F	Y	D	P	G	H	L	L	L	P	G	M	K	D	F	L	L	T	T	A	E	E	A	G	I	K	Y	Q	Y	Y	.	.	.	.	.	.	.	C	G	K	G	G	T	D	A	G	A	A	H	L	K	N	G	G
Template Known Secondary structure		S			T	T	S						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.				T	T																		T	T							.	.	.	.	.	.	.			S	S			T					T	T	S	T	T
Template Predicted Secondary structure													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																															.	.	.	.	.	.	.
Template SS confidence
		247	.	.	250	.	.	.	.	.	.	.																.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.								.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.
		277	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	P	A	I	M	I	T	D	T	A	F	Y	R	N	K	Q	Y	H	L	P	G	D	T	A	D	R	L	N	Y	Q	K	M	A	Q	V	V	D	G	V	I	T	L	L	Y	N	S	K
Query Conservation
Alig confidence												.	.	.	.
Template Conservation												.	.	.	.
Template Sequence		V	P	S	T	T	I	G	V	C	A	.	.	.	.	R	Y	I	H	S	H	Q	T	L	Y	A	M	D	D	F	L	E	A	Q	A	F	L	Q	A	L	V	K	K	L	D	R	S	T
Template Known Secondary structure												.	.	.	.	B	T		S	S	S																								S
Template Predicted Secondary structure												.	.	.	.
Template SS confidence
		305	.	.	.	.	310	.	.	.	.					.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions