Phyre 2 alignment of P76482 with c3isxA

Job Description P76482
Confidence 99.11% Date Thu Jan 5 12:23:24 GMT 2012

Rank 68 Aligned Residues 240

% Identity 20% Template c3isxA_

PDB info PDB header:hydrolase Chain: A: PDB Molecule:endoglucanase; PDBTitle: crystal structure of endoglucanase (tm1050) from thermotoga2 maritima at 1.40 a resolution

Resolution 1.40 Å

	Insertion relative to template
	Deletion relative to template
	Catalytic residue from the CSA

Detailed help on interpreting your alignment

	42	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.
Predicted Secondary structure
Query SS confidence
Query Sequence	E	K	T	V	R	Y	L	T	Q	T	V	H	P	R	S	A	D	N	I	D	N	L	N	R	S	A	E	Y	I	K	E	V	F	V	S	S	G	A	R	V	T	S	Q	D	V	P	I	T	G	G	P	Y	K	N	I	V	A	D	Y	G	P	A	D	G	P	L	I	I	I	G	A	H	Y	D	S	A	S	S	Y	E
Query Conservation
Alig confidence														.	.	.	.	.																													.	.	.	.	.	.	.										.
Template Conservation														.	.	.	.	.																													.	.	.	.	.	.	.										.
Template Sequence	K	E	L	I	R	K	L	T	E	A	F	G	P	.	.	.	.	.	S	G	R	E	E	E	V	R	S	I	I	L	E	E	L	E	G	H	I	D	G	H	R	I	D	G	L	G	.	.	.	.	.	.	.	N	L	I	V	W	K	G	S	G	.	E	K	K	V	I	L	D	A	H	I	D	E	I	G	V	V	V
Template Known Secondary structure										S			B	.	.	.	.	.	T	T														T	T	T		S						T	T		.	.	.	.	.	.	.										.	S	S										B
Template Predicted Secondary structure														.	.	.	.	.																													.	.	.	.	.	.	.										.
Template SS confidence
	2	.	.	.	.	.	.	.	10	.	.	.	.						.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.								.	.	.	.	.	.	.	50	.		.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.

	122	.
Predicted Secondary structure			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence	N	D	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Conservation			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence	T	N	V	D	D	K	G	F	L	T	I	E	P	V	G	G	V	S	P	Y	X	L	L	G	K	R	I	R	F	E	N	G	T	I	G	V	V	G	X	E	G	E	T	T	E	E	R	Q	E	N	V	R	K	L	S	F	D	K	L	F	I	D	I	G	A	N	S	R	E	E	A	Q	K	X	C	P	I	G	S	F
Template Known Secondary structure					T	T	S								S	S							T	T						T	T	S											S										T			G	G	G						S		S	S								S		T	T
Template Predicted Secondary structure
Template SS confidence
	69	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.

											124	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.
Predicted Secondary structure	.	.	.	.	.	.	.	.	.	.
Query SS confidence	.	.	.	.	.	.	.	.	.	.
Query Sequence	.	.	.	.	.	.	.	.	.	.	Q	L	T	Y	T	P	G	A	D	D	N	A	S	G	V	A	G	L	L	E	L	A	R	L	L	H	Q	Q	V	P	K	T	G	V	Q	L	V	A	Y	A	S	E	E	P	P	F	F	R	S	D	E	M	G	S	A	V	H	A	A	S	L	E	R	P	V	K	L	M	I	A
Query Conservation	.	.	.	.	.	.	.	.	.	.
Alig confidence	.	.	.	.	.	.	.	.	.	.																											.	.	.																							.	.	.	.	.	.	.
Template Conservation																																					.	.	.																							.	.	.	.	.	.	.
Template Sequence	G	V	Y	D	S	G	F	V	E	V	S	G	K	Y	V	S	K	A	X	D	D	R	I	G	C	A	V	I	V	E	V	F	K	R	I	K	.	.	.	P	A	V	T	L	Y	G	V	F	S	V	Q	E	E	V	G	L	V	G	A	S	V	.	.	.	.	.	.	.	A	G	Y	G	V	P	A	D	E	A	I	A
Template Known Secondary structure				S							T	T					S																				.	.	.		S	S												T	T	S			S	T	T	.	.	.	.	.	.	.	T	G	G	G				S
Template Predicted Secondary structure																																					.	.	.																							.	.	.	.	.	.	.
Template SS confidence
	149	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.				.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.								.	.	.	210	.	.	.	.	.	.	.	.

	194	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence	L	E	M	I	G	Y	Y	D	S	A	P	G	S	Q	N	Y	P	Y	P	A	M	S	W	L	Y	P	D	R	G	D	F	I	A	V	V	G	R	I	Q	D	I	N	A	V	R	Q	V	K	A	A	L	L	S	S	Q	D	L	S	V	Y	S	M	N	T	P	G	F	I	P	G	I	D	F	S	D	H	L	N	Y	W
Query Conservation
Alig confidence										.	.	.	.	.	.	.	.
Template Conservation										.	.	.	.	.	.	.	.
Template Sequence	I	D	V	T	D	S	A	D	T	.	.	.	.	.	.	.	.	P	K	A	I	K	R	H	A	X	R	L	S	G	G	P	A	L	K	V	K	D	R	A	S	I	S	S	K	R	I	L	E	N	L	I	E	I	A	E	K	F	D	I	K	Y	Q	X	E	V	L	T	F	G	G	T	N	A	X	G	Y	Q	R	T
Template Known Secondary structure									S	.	.	.	.	.	.	.	.	T	T				T	T				T	T	S							B	T	T																			T	T									B				S	S
Template Predicted Secondary structure										.	.	.	.	.	.	.	.
Template SS confidence
	219	220	.	.	.	.	.	.	.									.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290

	274	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence	Q	H	D	I	P	A	I	M	I	T	D	T	A	F	Y	R	N	K	Q	Y	H	L	P	G	D	T	A	D	R	L	N	Y	Q	K	M	A	Q	V	V	D	G	V	I	T	L	L
Query Conservation
Alig confidence														.	.	.	.								.	.	.
Template Conservation														.	.	.	.								.	.	.
Template Sequence	R	E	G	I	P	S	A	T	V	S	I	P	T	.	.	.	.	R	Y	V	H	S	P	S	.	.	.	E	X	I	A	P	D	D	V	E	A	T	V	D	L	L	I	R	Y	L
Template Known Secondary structure	T	S	S											.	.	.	.	B	S	T	T	S	T	T	.	.	.
Template Predicted Secondary structure														.	.	.	.								.	.	.
Template SS confidence
	291	.	.	.	.	.	.	.	.	300	.	.	.					.	.	.	.	.	.	310				.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.

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No model constructed - rank, confidence too low

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server

Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]

© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys
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