|   |
33 | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | |
|
|
|
|
|
|
|
|
|
|
|
|
. | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
| . | . | . | . | . | . | . | . | . | . | . | . | . |
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
P | R | H | A | S | P | E | Q | L | E | K | T | V | R | Y | L | T | Q | T | V | H | P | . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
R | S | A | D | N | I | D | N | L | N | R | S | A | E | Y | I | K | E | V | F | V | S | S | G | A | R | V | T | S | Q | D | V | P | I | T | G | G | P | Y | K | N | I | V | A | D |
Query Conservation |   |
  |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |   |   |   | . | . | . | . | . | . | . | . | . | . | . | . | . |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |   |   |   |   |
|   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |
|
|
|
|   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . |
|
|
|
|
|
Template Conservation |   |
  |   |   |   |   |   |   |
|   |   |   |   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |
|   |   |
|   |   |   |   |   |   |
|   |   |   |
|   |   |   |
|   |   |
|   |   |
|   |   |
| . | . | . | . | . | . | . |
|
|
|   |   |
Template Sequence |   |
P | L | S | I | A | S | G | R | L | N | Q | T | I | L | E | T | G | S | Q | F | G | G | V | A | R | W | G | Q | E | S | H | E | F | G | M | R | R | L | A | G | T | A | L | D | G | A | M | R | D | W | F | T | N | E | C | E | S | L | G | C | K | V | K | V | D | K | I | G | . |
. |
. |
. |
. |
. |
. |
N | M | F | A | V |
Template Known Secondary structure |   |
|
|
|
|
| T | T |  |  |  |  |  |  |  |  |  |  |  |  | T | T |  |  |
|
|
| S | S | S | T | T |
|
|  |  |
|
|
| T | T | S |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | T | T | T |
|  |  |  |  | B | T | T | S | . | . | . | . | . | . | . |
|  |  |  |  |
Template Predicted Secondary structure |   |
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |
|
|
|
| . | . | . | . | . | . | . |
|  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
27 | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | |
|
|
|
|
|
|
. | . | . | . | . |
  |
  |   |
100 | . | . | . | . | . | |
. | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . | . | . | . | . | |
|
150 | . | . | . | . | . | . | . | . | . | 160 | . | . | . | . | . | . | . | . | . | 170 | . | . | . | . | . | . |
Predicted Secondary structure |   |
 |
|
|
|
|
| . |
|  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . |
|
|
|
|
|
|
|  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
Y | G | P | A | D | G | . |
P | L | I | I | I | G | A | H | Y | D | S | A | S | S | Y | E | N | D | Q | L | T | Y | T | P | G | A | D | D | N | A | S | G | V | A | G | L | L | E | L | A | R | L | L | H | . |
. |
Q | Q | V | P | K | T | G | V | Q | L | V | A | Y | A | S | E | E | P | P | F | F | R | S | D | E | M | G |
Query Conservation |   |
  |   |
|   |   |   | . |   |   |
|
|
|   |
|
|
|
|
|   |   |   |   |   |   |   |   |   |   |   |   |
|
|
|   |
|
|
|
|
|
|
|   |
|
|
|
|
|
|   |
|   | . | . |   |   |   |   |   |   |   |
|   |
|
|   |
|   |
|
|
|   |
|
|   |
|
|   |   |   |   |
Alig confidence |   |
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |
|   |   |   |   |
|   |
|   |
|   |   |
|   |
|   |
|
|   |   | . | . | . | . | . | . | . | . | . |
|   |   |
|   |   |   |
|
|   |   |   |
|   |
|   |   |   |
|   |   |   |   |   |   |   |   |   |   |
|   |   |   |   |   |   |
|
|
|   |
|   |
|   |   |   |   |   |
|
Template Sequence |   |
Y | P | G | K | N | G | G | K | P | T | A | T | G | S | H | L | D | T | Q | P | E | A | . |
. |
. |
. |
. |
. |
. |
. |
. |
G | K | Y | D | G | I | L | G | V | L | A | G | L | E | V | L | R | T | F | K | D | N | N | Y | V | P | N | Y | D | V | C | V | V | V | W | F | N | E | E | G | A | R | F | A | R | S | C | T | G |
Template Known Secondary structure |   |
 |
|
| T | T |
| S | S |
|  |  |  |  |  |
|
|
|
|
| S | S | B | . | . | . | . | . | . | . | . | . |
| S | S | T | T |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | T | T |
|
|
| S | S |
|  |  |  |  |  |
| S |
|
| S |
| S | S | S | S |
| T | T |  |  |
Template Predicted Secondary structure |   |
 |  |
|
|
|
|
|
|  |  |  |  |  |  |  |
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . |
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | |
|
|
|
|
|
|
|
|
. | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . | . | . | . | . | 150 | . | . | . | . | . | . | . | . | . | 160 | . | . | . | . | . | . | . | . | . | 170 |
  |
  |   |
177 | . | . | 180 | . |
Predicted Secondary structure |   |
 |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
Query Sequence |   |
S | A | V | H | A |
Query Conservation |   |
  |   |   |   |   |
Alig confidence |   |
|
|
|
|
|
Template Conservation |   |
  |   |   |   |   |
Template Sequence |   |
S | S | V | W | S |
Template Known Secondary structure |   |
 |  |  |  | T |
Template Predicted Secondary structure |   |
 |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
  |   |
171 | . | . | . | . |
  |