Job Description P76482 Confidence 99.59% Date Thu Jan 5 12:23:24 GMT 2012 Rank 40 Aligned Residues 266 % Identity 15% Template c2rb7A_ PDB info PDB header:hydrolase Chain: A: PDB Molecule:peptidase, m20/m25/m40 family; PDBTitle: crystal structure of co-catalytic metallopeptidase (yp_387682.1) from2 desulfovibrio desulfuricans g20 at 1.60 a resolution Resolution 1.60 Å

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		36	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	S	P	E	Q	L	E	K	T	V	R	Y	L	T	Q	T	V	H	P	R	S	A	D	N	I	D	N	L	N	R	S	A	E	Y	I	K	E	V	F	V	S	S	G	A	R	V	T	S	Q	D	V	P	I	T	G	G	P	Y	K	N	I	V	A	D	Y	G	P	A	D	G	P	L	I	I	I	G	A	H	Y	D
Query Conservation
Alig confidence																	.	.																																			.	.	.	.									.
Template Conservation																	.	.																																			.	.	.	.									.
Template Sequence		S	S	X	Q	H	I	V	E	L	T	S	D	L	I	R	.	.	F	P	S	X	H	S	R	P	E	Q	I	S	R	C	A	G	F	I	X	D	W	C	A	Q	N	G	I	H	A	E	R	X	D	H	.	.	.	.	D	G	I	P	S	V	X	V	.	L	P	E	K	G	R	A	G	L	L	L	X	A	H	I	D
Template Known Secondary structure																T	.	.	S				T	T																			T	T									.	.	.	.	T	T							.		S	B	T	T
Template Predicted Secondary structure																	.	.																																			.	.	.	.									.
Template SS confidence
		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.			.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50					.	.	.	.	.	.	.	.		.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.
		116	.	.	.	120	.	.								.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.								150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.
Predicted Secondary structure									.	.	.	.	.	.	.																												.	.	.	.	.	.	.
Query SS confidence									.	.	.	.	.	.	.																												.	.	.	.	.	.	.
Query Sequence		S	A	S	S	Y	E	N	.	.	.	.	.	.	.	D	Q	L	T	Y	T	P	G	A	D	D	N	A	S	G	V	A	G	L	L	E	L	A	R	L	L	H	.	.	.	.	.	.	.	Q	Q	V	P	K	T	G	V	Q	L	V	A	Y	A	S	E	E	P	P	F	F	R	S	D	E	M	G	S	A	V	H	A
Query Conservation									.	.	.	.	.	.	.																												.	.	.	.	.	.	.
Alig confidence									.	.	.	.	.	.	.																												.	.	.	.	.	.	.																											.	.	.	.	.	.
Template Conservation																																																																												.	.	.	.	.	.
Template Sequence		V	V	D	A	E	D	D	L	F	V	P	R	V	E	N	D	R	L	Y	G	R	G	A	N	D	D	K	Y	A	V	A	L	G	L	V	X	F	R	D	R	L	N	A	L	K	A	A	G	R	S	Q	K	D	X	A	L	G	L	L	I	T	G	D	E	E	I	G	G	X	N	G	A	A	K	.	.	.	.	.	.
Template Known Secondary structure							G	G	G	G	S					T	T				S	T	T	T	T	T	T																					T	T			G	G	G									S		G	G	G	T	S	T	T	T				.	.	.	.	.	.
Template Predicted Secondary structure																																																																												.	.	.	.	.	.
Template SS confidence
		75	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.
		182	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	S	L	E	R	P	V	K	L	M	I	A	L	E	M	I	G	Y	Y	D	S	A	P	G	S	Q	N	Y	P	Y	P	A	M	S	W	L	Y	P	D	R	G	D	F	I	A	V	V	G	R	I	Q	D	I	N	A	V	R	Q	V	K	A	A	L	L	S	S	Q	D	L	S	V	Y	S	M	N	T	P	G	F	I
Query Conservation
Alig confidence		.
Template Conservation		.
Template Sequence		.	A	L	P	L	I	R	A	D	Y	V	V	A	L	D	G	G	N	P	Q	Q	V	I	T	K	E	K	G	I	I	D	I	K	L	T	C	T	G	K	A	A	H	G	A	R	P	W	X	G	V	N	A	V	D	L	L	X	E	D	Y	T	R	L	K	T	L	F	A	E	E	N	E	D	H	W	H	R	T	V	N
Template Known Secondary structure		.		G	G	G										S	S	S	B	T	T																			B				T	T	S	G	G	G	S	B															T	T	S					T	T			S
Template Predicted Secondary structure		.
Template SS confidence
			149	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.
		262	.																																																																												.	.	.
Predicted Secondary structure				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		P	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	I	D	F
Query Conservation				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		L	G	R	I	R	A	G	E	S	T	N	K	V	P	D	V	A	E	G	W	F	N	I	R	V	T	E	H	D	D	P	G	A	L	I	D	K	I	R	K	T	V	S	G	T	V	S	I	V	R	T	V	P	V	F	L	A	A	D	S	P	Y	T	E	R	L	L	A	L	S	G	A	T	A	G	K	A	H	G	A
Template Known Secondary structure									S		T	T				S												T	T	S														S	S																																		S	S
Template Predicted Secondary structure
Template SS confidence
		228	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.
		267	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	D	H	L	N	Y	W	Q	H	D	I	P	A	I	M	I	T	D	T	A	F	Y	R	N	K	Q	Y	H	L	P	G	D	T	A	D	R	L	N	Y	Q	K	M	A	Q	V	V	D	G	V	I	T	L	L	Y	N
Query Conservation
Alig confidence																		.	.	.													.	.	.
Template Conservation																		.	.	.													.	.	.
Template Sequence		S	D	A	R	Y	L	G	E	N	G	L	T	G	V	V	W	.	.	.	G	A	E	G	F	N	T	L	H	S	R	D	.	.	.	E	C	L	H	I	P	S	L	Q	S	I	Y	D	P	L	X	Q	L	A	R	E
Template Known Secondary structure			G	G	G	G	T	G	G	G	T							.	.	.					T	T		T	T	S	T	T	.	.	.					T	T
Template Predicted Secondary structure																		.	.	.													.	.	.
Template SS confidence
		308	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.				.	.	.	.	.	.	330	.	.	.	.	.				.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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