Job Description P76482 Confidence 99.32% Date Thu Jan 5 12:23:24 GMT 2012 Rank 61 Aligned Residues 240 % Identity 15% Template c2pe3A_ PDB info PDB header:hydrolase Chain: A: PDB Molecule:354aa long hypothetical operon protein frv; PDBTitle: crystal structure of frv operon protein frvx (ph1821)from pyrococcus2 horikoshii ot3 Resolution 2.00 Å

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		44	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		T	V	R	Y	L	T	Q	T	V	H	P	R	S	A	D	N	I	D	N	L	N	R	S	A	E	Y	I	K	E	V	F	V	S	S	G	A	R	V	T	S	Q	D	V	P	I	T	G	G	P	Y	K	N	I	V	A	D	Y	G	P	A	D	G	P	L	I	I	I	G	A	H	Y	D	S	A	S	S	Y	E	N	D
Query Conservation
Alig confidence																							.																							.	.	.	.	.	.	.										.
Template Conservation																							.																							.	.	.	.	.	.	.										.
Template Sequence		D	W	K	L	M	Q	E	I	I	E	A	P	G	V	S	G	Y	E	H	L	G	.	I	R	D	I	V	V	D	V	L	K	E	V	A	D	E	V	K	V	D	K	L	G	.	.	.	.	.	.	.	N	V	I	A	H	F	K	G	S	.	S	P	R	I	M	V	A	A	H	M	D	K	I	G	V	M	V	N	H
Template Known Secondary structure												S			B	T	T		G	G	G	T	.											T	T		S						T	T		.	.	.	.	.	.	.									S	.	S	S										B
Template Predicted Secondary structure																							.																							.	.	.	.	.	.	.										.
Template SS confidence
		11	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.		.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.								.	.	.	.	.	.	60	.	.		.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		I	D	K	D	G	Y	L	H	I	V	P	I	G	G	V	L	P	E	T	L	V	A	Q	R	I	R	F	F	T	E	K	G	E	R	Y	G	V	V	G	V	L	P	D	W	D	Q	I	V	V	D	V	G	A	S	S	K	E	E	A	E	E	M	G	F	R	V	G	T	V	G	E	F	A	P	N	F	T	R	L	N
Template Known Secondary structure				T	T	S								S	S			G	G	G	G	T	T								T	T														T	T						S		S	S							T	T			T	T													S
Template Predicted Secondary structure
Template SS confidence
		82	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.
		124	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Q	L	T	Y	T	P	G	A	D	D	N	A	S	G	V	A	G	L	L	E	L	A	R	L	L	H	Q	Q	V	P	K	T	G	V	Q	L	V	A	Y	A	S	E	E	P	P	F	F	R	S	D	E	M	G	S	A	V	H	A	A	S	L	E	R	P	V	K	L	M	I	A	L	E	M	I	G	Y	Y	D	S	A
Query Conservation
Alig confidence																														.	.																																							.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																														.	.																																							.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		E	H	R	F	A	T	P	Y	L	D	D	R	I	C	L	Y	A	M	I	E	A	A	R	Q	L	G	D	H	.	.	E	A	D	I	Y	I	V	G	S	V	Q	E	E	V	G	L	R	G	A	R	V	A	S	Y	A	I	N	P	E	V	G	I	A	M	D	V	T	F	.	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure		S	S					T	T																T					.	.	S	S								S	S		T	T	T	S													S										.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																														.	.																																							.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		176	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.			.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.
		204	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.			.	.	.	.	280	.
Predicted Secondary structure																																																																										.	.
Query SS confidence																																																																										.	.
Query Sequence		P	G	S	Q	N	Y	P	Y	P	A	M	S	W	L	Y	P	D	R	G	D	F	I	A	V	V	G	R	I	Q	D	I	N	A	V	R	Q	V	K	A	A	L	L	S	S	Q	D	L	S	V	Y	S	M	N	T	P	G	F	I	P	G	I	D	F	S	D	H	L	N	Y	W	Q	H	.	.	D	I	P	A	I	M
Query Conservation																																																																										.	.
Alig confidence		.	.	.	.																																																					.	.	.	.													.	.
Template Conservation		.	.	.	.																																																					.	.	.	.
Template Sequence		.	.	.	.	A	K	Q	P	H	D	K	G	K	I	V	P	E	L	G	K	G	P	V	M	D	V	G	P	N	I	N	P	K	L	R	A	F	A	D	E	V	A	K	K	Y	E	I	P	L	Q	V	E	P	S	P	R	.	.	.	.	P	T	G	T	D	A	N	V	M	Q	I	N	R	E	G	V	A	T	A	V
Template Known Secondary structure		.	.	.	.				T	T		T	T						T	T	S							S	T	T	S																T										S	.	.	.	.			S	S	T						T	S	T	T
Template Predicted Secondary structure		.	.	.	.																																																					.	.	.	.
Template SS confidence
						242	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.					.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.
		282	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	T	D	T	A	F	Y	R	N	K	Q	Y	H	L	P	G	D	T	A	D	R	L	N	Y	Q	K	M	A	Q	V	V	D	G	V	I	T	L	L	Y	N
Query Conservation
Alig confidence						.	.	.	.									.	.	.
Template Conservation						.	.	.	.									.	.	.
Template Sequence		L	S	I	P	.	.	.	.	I	R	Y	M	H	S	Q	V	.	.	.	E	L	A	D	A	R	D	V	D	N	T	I	K	L	A	K	A	L	L	E	E
Template Known Secondary structure						.	.	.	.		B	S	T	T	S	T	T	.	.	.
Template Predicted Secondary structure						.	.	.	.									.	.	.
Template SS confidence
		314	.	.	.					.	.	320	.	.	.	.	.				.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions