Job Description P76482 Confidence 98.93% Date Thu Jan 5 12:23:24 GMT 2012 Rank 70 Aligned Residues 223 % Identity 18% Template c2cf4A_ PDB info PDB header:hydrolase Chain: A: PDB Molecule:protein ph0519; PDBTitle: pyrococcus horikoshii tet1 peptidase can assemble into a2 tetrahedron or a large octahedral shell Resolution 3.08 Å

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		60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.
Predicted Secondary structure																																																																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		I	D	N	L	N	R	S	A	E	Y	I	K	E	V	F	V	S	S	G	A	R	V	T	S	Q	D	V	P	I	T	G	G	P	Y	K	N	I	V	A	D	Y	G	P	A	D	G	P	L	I	I	I	G	A	H	Y	D	S	A	S	S	Y	E	N	D	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Conservation																																																																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																					.									.	.	.	.	.	.	.									.																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																					.									.	.	.	.	.	.	.									.
Template Sequence		S	G	Y	E	E	R	I	R	E	E	I	I	R	E	I	K	D	F	A	.	D	Y	K	V	D	A	I	G	.	.	.	.	.	.	.	N	L	I	V	E	L	G	E	.	G	E	E	R	I	L	F	X	A	H	X	D	E	I	G	L	L	I	T	G	I	T	D	E	G	K	L	R	F	R	K	V	G	G	I	D
Template Known Secondary structure		T	T												T	T	T	T	S	S	.						S	S	S	.	.	.	.	.	.	.							S		.	S	S																					T	T	S								S
Template Predicted Secondary structure																					.									.	.	.	.	.	.	.									.
Template SS confidence
		17	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.		.	.	.	.	40	.	.	.								.	.	.	.	.	.	50	.		.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.
																																																																													124	.	.	.	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	Q	L	T	Y	T
Query Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		D	R	L	L	Y	G	R	H	V	N	V	V	T	E	K	G	I	L	D	G	V	I	G	A	T	P	P	H	L	S	L	E	R	D	K	S	V	I	P	W	Y	D	L	V	I	D	I	G	A	E	S	K	E	E	A	L	E	L	V	K	P	L	D	F	A	V	F	K	K	H	F	S	V	L	N	G	K	Y	V	S
Template Known Secondary structure		G	G	G	T	T	T								S	S													S	S		S	S				S				T	T	S			B	B				S	S						T	T			T	T													S	S	S
Template Predicted Secondary structure
Template SS confidence
		88	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.
		129	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		P	G	A	D	D	N	A	S	G	V	A	G	L	L	E	L	A	R	L	L	H	Q	Q	V	P	K	T	G	V	Q	L	V	A	Y	A	S	E	E	P	P	F	F	R	S	D	E	M	G	S	A	V	H	A	A	S	L	E	R	P	V	K	L	M	I	A	L	E	M	I	G	Y	Y	D	S	A	P	G	S	Q	N
Query Conservation
Alig confidence																																																	.	.	.	.	.	.	.
Template Conservation																																																	.	.	.	.	.	.	.
Template Sequence		T	R	G	L	D	D	R	F	G	V	V	A	L	I	E	A	I	K	D	L	V	D	H	E	L	E	G	K	V	I	F	A	F	T	V	Q	E	E	V	G	L	K	G	A	K	F	L	.	.	.	.	.	.	.	A	N	H	Y	Y	P	Q	Y	A	F	A	I	D	S	F	A	C	C	S	P	L	T	G	D	V	K
Template Known Secondary structure			T	T																S	S	G	G	G			S	S								S	S		T	T	T	S							.	.	.	.	.	.	.	T	T	T				S	S										S	S	S	S	S	T	T
Template Predicted Secondary structure																																																	.	.	.	.	.	.	.
Template SS confidence
		168	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.								.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240
		209	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Y	P	Y	P	A	M	S	W	L	Y	P	D	R	G	D	F	I	A	V	V	G	R	I	Q	D	I	N	A	V	R	Q	V	K	A	A	L	L	S	S	Q	D	L	S	V	Y	S	M	N	T	P	G	F	I	P	G	I	D	F	S	D	H	L	N	Y	W	Q	H	D	I	P	A	I	M	I	T	D	T	A	F	Y
Query Conservation
Alig confidence																		.	.	.	.	.	.	.	.																.	.	.	.	.	.	.																			.														.	.
Template Conservation																		.	.	.	.	.	.	.	.																.	.	.	.	.	.	.																			.														.	.
Template Sequence		L	G	K	G	P	V	I	R	A	V	D	N	S	A	I	Y	.	.	.	.	.	.	.	.	S	R	D	L	A	R	K	V	W	S	I	A	E	K	N	.	.	.	.	.	.	.	G	I	E	I	Q	I	G	V	T	G	G	G	T	D	A	S	A	F	.	Q	D	R	S	K	T	L	A	L	S	V	P	I	.	.
Template Known Secondary structure		T	T	S									S	S		B		.	.	.	.	.	.	.	.														T	T	.	.	.	.	.	.	.	T									S	S			G	G	G	G	T	.	T	T	S	S										.	.
Template Predicted Secondary structure																		.	.	.	.	.	.	.	.																.	.	.	.	.	.	.																			.														.	.
Template SS confidence
		241	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.									.	.	.	260	.	.	.	.	.	.	.	.	.	270	.								.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.		290	.	.	.	.	.	.	.	.	.	300	.	.
		289	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	N	K	Q	Y	H	L	P	G	D	T	A	D	R	L	N	Y	Q	K	M	A	Q	V	V	D	G	V	I	T	L	L	Y	N
Query Conservation
Alig confidence		.	.								.	.	.
Template Conservation		.	.								.	.	.
Template Sequence		.	.	K	Y	L	H	S	E	V	.	.	.	E	T	L	H	L	N	D	L	E	K	L	V	K	L	I	E	A	L	A	F	E
Template Known Secondary structure		.	.		S	T	T	T	T	T	.	.	.													T	T	S	S	T	T	T	T	T
Template Predicted Secondary structure		.	.								.	.	.
Template SS confidence
				303	.	.	.	.	.	.				310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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