Job Description P76482 Confidence 99.16% Date Thu Jan 5 12:23:24 GMT 2012 Rank 66 Aligned Residues 248 % Identity 20% Template c1y0yA_ PDB info PDB header:hydrolase Chain: A: PDB Molecule:frv operon protein frvx; PDBTitle: crystal structure of tetrahedral aminopeptidase from p. horikoshii in2 complex with amastatin Resolution 1.60 Å

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		45	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.
Predicted Secondary structure																																																																																	.
Query SS confidence																																																																																	.
Query Sequence		V	R	Y	L	T	Q	T	V	H	P	R	S	A	D	N	I	D	N	L	N	R	S	A	E	Y	I	K	E	V	F	V	S	S	G	A	R	V	T	S	Q	D	V	P	I	T	G	G	P	Y	K	N	I	V	A	D	Y	G	P	A	D	G	P	L	I	I	I	G	A	H	Y	D	S	A	S	S	Y	E	N	D	.
Query Conservation																																																																																	.
Alig confidence																						.																							.	.	.	.	.	.	.											.																			.
Template Conservation																						.																							.	.	.	.	.	.	.											.
Template Sequence		Y	E	L	L	K	K	V	V	E	A	P	G	V	S	G	Y	E	F	L	G	.	I	R	D	V	V	I	E	E	I	K	D	Y	V	D	E	V	K	V	D	K	L	G	.	.	.	.	.	.	.	N	V	I	A	H	K	K	G	E	G	.	P	K	V	M	I	A	A	H	M	D	Q	I	G	L	M	V	T	H	I
Template Known Secondary structure											S			B	T	T		G	G	G	T	.										G	G	G	S	S						T	T		.	.	.	.	.	.	.									S	S	.											B
Template Predicted Secondary structure																						.																							.	.	.	.	.	.	.											.
Template SS confidence
		9	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.		.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50								.	.	.	.	.	.	.	.	.	60		.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		E	K	N	G	F	L	R	V	A	P	I	G	G	V	D	P	K	T	L	I	A	Q	R	F	K	V	W	I	D	K	G	K	F	I	Y	G	V	G	A	S	A	P	D	W	D	Q	I	F	I	D	I	G	A	E	S	K	E	E	A	E	D	M	G	V	K	I	G	T	V	I	T	W	D	G	R	L	E	R	L	G
Template Known Secondary structure			T	T	S								S	S			G	G	G	T	T	T									T	T													G	G	G						S		S	S							T	T			T	T													T
Template Predicted Secondary structure
Template SS confidence
		80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.
		124	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Q	L	T	Y	T	P	G	A	D	D	N	A	S	G	V	A	G	L	L	E	L	A	R	L	L	H	Q	Q	V	P	K	T	G	V	Q	L	V	A	Y	A	S	E	E	P	P	F	F	R	S	D	E	M	G	S	A	V	H	A	A	S	L	E	R	P	V	K	L	M	I	A	L	E	M	I	G	Y	Y	D	S	A
Query Conservation
Alig confidence																																	.	.																																				.	.	.	.	.	.	.	.	.	.
Template Conservation																																	.	.																																				.	.	.	.	.	.	.	.	.	.
Template Sequence		K	H	R	F	V	S	I	A	F	D	D	R	I	A	V	Y	T	I	L	E	V	A	K	Q	L	K	D	A	K	A	D	.	.	V	Y	F	V	A	T	V	Q	E	E	V	G	L	R	G	A	R	T	S	A	F	G	I	E	P	D	Y	G	F	A	I	D	V	T	I	.	.	.	.	.	.	.	.	.	.	A	A
Template Known Secondary structure		T	T					T	T																			S		S	S		.	.							S			T	T	T	S													S										.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																	.	.																																				.	.	.	.	.	.	.	.	.	.
Template SS confidence
		173	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.			.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.											.	240
		204	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.			.	.	.	.	.	.	.	280	.
Predicted Secondary structure																																																																							.	.
Query SS confidence																																																																							.	.
Query Sequence		P	G	S	Q	N	Y	P	Y	P	A	M	S	W	L	Y	P	D	R	G	D	F	I	A	V	V	G	R	I	Q	D	I	N	A	V	R	Q	V	K	A	A	L	L	S	S	Q	D	L	S	V	Y	S	M	N	T	P	G	F	I	P	G	I	D	F	S	D	H	L	N	Y	.	.	W	Q	H	D	I	P	A	I	M
Query Conservation																																																																							.	.
Alig confidence																																																										.	.	.	.	.	.								.	.
Template Conservation																																																										.	.	.	.	.	.
Template Sequence		D	I	P	G	T	P	E	H	K	Q	V	T	H	L	G	K	G	T	A	I	K	I	M	D	R	S	V	I	C	H	P	T	I	V	R	W	L	E	E	L	A	K	K	H	E	I	P	Y	Q	L	E	I	L	L	G	G	.	.	.	.	.	.	G	T	D	A	G	A	I	H	L	T	K	A	G	V	P	T	G	A
Template Known Secondary structure			S	T	T			G	G	G					T	T	S									T	T																		T	T									S	S		.	.	.	.	.	.			T					T	T	S	T	T
Template Predicted Secondary structure																																																										.	.	.	.	.	.
Template SS confidence
		241	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.							.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.
		282	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	T	D	T	A	F	Y	R	N	K	Q	Y	H	L	P	G	D	T	A	D	R	L	N	Y	Q	K	M	A	Q	V	V	D	G	V	I	T	L	L	Y	N	S	K
Query Conservation
Alig confidence							.	.	.	.
Template Conservation							.	.	.	.
Template Sequence		L	S	V	P	A	.	.	.	.	R	Y	I	H	S	N	T	E	V	V	D	E	R	D	V	D	A	T	V	E	L	M	T	K	A	L	E	N	I	H	E	L	K
Template Known Secondary structure							.	.	.	.	B	S		S	S	S																							G	G	G
Template Predicted Secondary structure							.	.	.	.
Template SS confidence
		315	.	.	.	.					320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions