Return to main results Retrieve Phyre Job Id

Job DescriptionP76482
Confidence99.44%DateThu Jan 5 12:23:24 GMT 2012
Rank54Aligned Residues134
% Identity16%Templatec1lfwA_
PDB info PDB header:hydrolaseChain: A: PDB Molecule:pepv; PDBTitle: crystal structure of pepv
Resolution1.80 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   35....40.........50.........60. ........70.........80.........90.........100. ...
Predicted Secondary structure 











.........










.


Query SS confidence 


























. . . . . . . . .







































.


Query Sequence  HASPEQLEKTVRYLTQTVHPRSADNID. . . . . . . . . NLNRSAEYIKEVFVSSGARVTSQDVPITGGPYKNIVADYG. PAD
Query Conservation               
      
      .........        
       
  
             



   .
  
Alig confidence 















..








.........























.........






.


Template Conservation         
  
  

 ..


 
  
                  
       
       .........           
Template Sequence  EAKKDAILKDLEELIA. . IDSSEDLENATEEYPVGKGPVDAMTKFLSFAKRDGFDTENFA. . . . . . . . . NYAGRVNFGAG
Template Known Secondary structure  TTT..S

B

GGG

SSSTT
TT
T.........TT


Template Predicted Secondary structure 
..




















.........




Template SS confidence 















































































   10.........20..... ....30.........40.........50.........60....... ..70........
 
   105....110.........120 .........130.........140......... 150.........160.........170
Predicted Secondary structure 









............













..









Query SS confidence 















. . . . . . . . . . . .




























. .




















Query Sequence  GPLIIIGAHYDSASSY. . . . . . . . . . . . ENDQLTYTPGADDNASGVAGLLELARLLH. . QQVPKTGVQLVAYASEEPPFF
Query Conservation     


 




    ............        


 






 





 
 ..       
 

 
 


 

 
Alig confidence 















............




























..




















Template Conservation     


  
 



    
   

             
  
 
        
   
          
       

 
  
Template Sequence  DKRLGIIGHMDVVPAGEGWTRDPFKMEIDEEGRIYGRGSADDKGPSLTAYYGMLLLKEAGFKPKKKIDFVLGTNEETNWV
Template Known Secondary structure  SS

B



S

SS
TTS

TT
STTSSSST


SSS
TTTT
Template Predicted Secondary structure 














































Template SS confidence 















































































   7980.........90.........100.........110.........120.........130.........140.........150........
 
   171........
Predicted Secondary structure 
Query SS confidence 








Query Sequence  RSDEMGSAV
Query Conservation 

       
Alig confidence 








Template Conservation 
        
Template Sequence  GIDYYLKHE
Template Known Secondary structure  S
Template Predicted Secondary structure 


Template SS confidence 








   159160.......
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions